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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
target gene predictions
69
candidate regulatory elements
36
chromatin state
10
accessible chromatin
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
52
July, 2026
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
Available data
185
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
220
Homo sapiens
Collection Tags
99
EpiMap
52
ENCODE-rE2G
36
ENCODE
12
ChIP-Atlas
6
AMP
6
DGA
6
T2DKP
2
4DN
2
GTEx
2
T1D
2
T2D
2
eQTLCatalogue
Biosample type
161
tissue
53
cell line
6
primary cell
Organ
3320
blood
2881
vasculature
2845
blood vessel
2807
bodily fluid
2656
vein
909
epithelium
887
brain
749
kidney
487
connective tissue
483
heart
431
lung
379
musculature of body
352
intestine
314
pancreas
278
skin of body
242
limb
227
liver
220
large intestine
202
embryo
171
extraembryonic component
155
eye
140
adipose tissue
140
stomach
111
muscle organ
102
adrenal gland
98
bone element
97
small intestine
94
placenta
92
mammary gland
92
thymus
89
uterus
82
artery
79
prostate gland
73
ureter
62
spleen
61
gonad
60
__MARKER__
57
penis
50
lymph node
48
esophagus
47
spinal cord
47
thyroid gland
32
ovary
28
testis
25
nerve
24
lymphoid tissue
24
skeleton
21
mouth
19
lymphatic vessel
15
breast
14
bronchus
13
pituitary gland
13
urinary bladder
12
tongue
12
vagina
11
bone marrow
4
nose
3
trachea
1
embryonic structure
1
gallbladder
1
pericardium
Project
214
AMP
6
ENCODE
Genome assembly (visualization)
164
hg19
95
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
220 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
histone modifications
eQTL
gene expression
tissue
large intestine
28
27
13
1
1
sigmoid colon
10
10
5
1
transverse colon
9
8
4
1
1
colonic mucosa
4
4
3
1
mucosa of rectum
2
4
3
+ See 8 more…
cell line
HCT116
19
2
1
HT-29
3
2
1
1
1
SW480
2
2
1
1
1
Caco-2
3
1
RKO
1
1
1
1
+ See 4 more…
primary cell
colon epithelial cell
3
3
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