Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
98
candidate regulatory elements
52
chromatin state
51
target gene predictions
20
accessible chromatin
9
Fine-mapped variants
8
variant allelic effects
6
eQTL
6
gene expression
binding sites
2
histone modifications
Date released
144
September, 2022
58
February, 2021
10
May, 2020
9
March, 2020
7
January, 2020
6
February, 2020
6
June, 2020
3
January, 2022
3
May, 2021
2
March, 2024
2
May, 2019
2
November, 2019
Available data
179
bed bed3+
52
bed bed9
18
tsv
14
bigWig
4
bigBed bed9
Organism
252
Homo sapiens
Biosample type
245
tissue
6
cell line
1
primary cell
Organ
916
epithelium
645
kidney
450
brain
437
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
252
heart
248
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
145
liver
143
extraembryonic component
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
22
lymphatic vessel
20
vein
19
mouth
18
skeleton
14
bronchus
13
breast
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
252
AMP
Genome assembly (visualization)
243
hg19
81
GRCh38
annotation_type!
binding sites
organ_slims!
pituitary gland
BIOSAMPLE
TYPE
252 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
Fine-mapped variants
variant allelic effects
eQTL
gene expression
histone modifications
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
15
14
2
tibial nerve
6
4
3
3
3
2
2
2
tibial artery
3
3
2
3
3
2
2
1
gastrocnemius medialis
8
4
5
1
+ See 19 more…
cell line
GM23248
2
1
1
1
1
primary cell
fibroblast of arm
1
See all biosamples
Download