Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
82
candidate regulatory elements
56
gene expression
54
accessible chromatin
54
target gene predictions
52
chromatin state
binding sites
22
histone modifications
19
differential activity
19
variant allelic effects
15
eQTL
12
Fine-mapped variants
4
caQTL
Date released
127
September, 2022
61
February, 2021
35
September, 2023
26
February, 2024
22
March, 2020
19
January, 2020
18
May, 2020
11
June, 2020
10
August, 2021
9
November, 2021
7
February, 2020
6
May, 2021
5
January, 2022
5
May, 2024
4
August, 2017
4
February, 2023
4
March, 2023
4
November, 2019
3
April, 2020
2
March, 2024
2
May, 2022
2
October, 2019
1
July, 2020
1
May, 2019
1
September, 2018
Available data
235
bed bed3+
85
tsv
48
bed bed9
48
bigWig
9
bigBed bed9
3
csv
2
txt
1
bam
Organism
389
Homo sapiens
Biosample type
200
primary cell
151
tissue
30
cell line
8
in vitro differentiated cells
Organ
916
epithelium
645
kidney
450
brain
437
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
252
heart
248
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
145
liver
143
extraembryonic component
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
22
lymphatic vessel
20
vein
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
342
AMP
35
KPMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
302
hg19
133
GRCh38
1
hg18
annotation_type!
binding sites
BIOSAMPLE
TYPE
389 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
histone modifications
differential activity
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
2
13
8
3
1
4
2
endothelial cell of umbilical vein
6
2
4
5
1
dermis blood vessel endothelial cell
6
2
2
endothelial cell of hepatic sinusoid
4
6
hepatic stellate cell
2
1
3
1
1
1
1
+ See 28 more…
tissue
liver
13
1
4
10
9
2
1
7
1
coronary artery
3
1
3
3
3
2
2
3
1
tibial artery
3
1
3
2
3
2
2
3
ascending aorta
4
1
1
2
3
1
1
3
aorta
4
1
4
4
+ See 7 more…
cell line
HepG2
2
2
3
2
5
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
smooth muscle cell of the coronary artery
1
1
1
choroid plexus epithelial cell
1
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
See all biosamples
Download