Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 20candidate regulatory elements
  • 14target gene predictions
  • 11chromatin state
  • 2accessible chromatin
  • binding sites
  • 1histone modifications
Date released
  • 33September, 2022
  • 10February, 2021
  • 1June, 2020
  • 1March, 2020
  • 1May, 2020
  • 1May, 2021
  • 1November, 2021
Available data
  • 37bed bed3+
  • 11bed bed9
  • 1bigWig
Organism
  • 48Homo sapiens
Collection Tags
  • 33EpiMap
  • 9ENCODE
  • 2ChIP-Atlas
  • 2DGA
  • 1AMP
  • 1BLUEPRINT
  • 1T1D
  • 1T2DKP
Biosample type
  • 47tissue
  • 1primary cell
Organ
  • 2892vasculature
  • 2832blood vessel
  • 2813bodily fluid
  • 2803blood
  • 2655vein
  • 915epithelium
  • 645kidney
  • 451brain
  • 449connective tissue
  • 373musculature of body
  • 302lung
  • 283intestine
  • 272pancreas
  • 252heart
  • 242limb
  • 202embryo
  • 186skin of body
  • 168large intestine
  • 150liver
  • 143extraembryonic component
  • 119stomach
  • 103eye
  • 97adipose tissue
  • 84small intestine
  • 81bone element
  • 79uterus
  • 75mammary gland
  • 73adrenal gland
  • 73artery
  • 70placenta
  • 70prostate gland
  • 64ureter
  • 57penis
  • 50lymph node
  • 48thymus
  • 47gonad
  • 45esophagus
  • 41spinal cord
  • 33spleen
  • 25nerve
  • 24lymphoid tissue
  • 23ovary
  • 23testis
  • 23thyroid gland
  • 22lymphatic vessel
  • 19mouth
  • 18skeleton
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 11bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 4nose
  • 3trachea
  • 1pericardium
Project
  • 47AMP
  • 1ENCODE
Genome assembly (visualization)
  • 48hg19
  • 12GRCh38
annotation_type!
  • binding sites
BIOSAMPLE
TYPE

48 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
tissue
thymus20141111
primary cell
fetal thymocyte1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego