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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 5variant allelic effects
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2511September, 2022
  • 1871February, 2021
  • 389May, 2021
  • 333November, 2021
  • 316February, 2024
  • 289June, 2020
  • 286September, 2023
  • 127August, 2021
  • 127March, 2020
  • 106January, 2022
  • 89January, 2020
  • 76May, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 10October, 2022
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5147bed bed3+
  • 3576tsv
  • 869bed bed9
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 12bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9667Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1130ChIP-Atlas
  • 873ENCODE
  • 533AMP
  • 509DGA
  • 421T1D
  • 402T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 164 T2DKP
  • 151GTEx
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5239tissue
  • 2337primary cell
  • 1707cell line
  • 426in vitro differentiated cells
  • 4stem cell
Organ
  • 2877vasculature
  • 2823blood vessel
  • 2813bodily fluid
  • 2803blood
  • 2654vein
  • 874epithelium
  • 629kidney
  • 434brain
  • 433connective tissue
  • 366musculature of body
  • 301lung
  • 280intestine
  • 261pancreas
  • 242heart
  • 234limb
  • 202embryo
  • 185skin of body
  • 168large intestine
  • 146liver
  • 143extraembryonic component
  • 117stomach
  • 101eye
  • 94adipose tissue
  • 84small intestine
  • 81bone element
  • 79uterus
  • 74mammary gland
  • 72adrenal gland
  • 70placenta
  • 69artery
  • 69prostate gland
  • 61ureter
  • 57penis
  • 50lymph node
  • 48thymus
  • 47gonad
  • 43esophagus
  • 41spinal cord
  • 33spleen
  • 24lymphoid tissue
  • 23nerve
  • 23ovary
  • 23testis
  • 22lymphatic vessel
  • 22thyroid gland
  • 19mouth
  • 18skeleton
  • 13breast
  • 13bronchus
  • 13pituitary gland
  • 11bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 4nose
  • 3trachea
  • 1pericardium
Project
  • 9004AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6066hg19
  • 1903GRCh38
  • 3hg18
annotation_type!
  • binding sites
software_used.software.name!
  • deltasvm
BIOSAMPLE
TYPE

9715 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
gene expression
eQTL
differential activity
Fine-mapped variants
caQTL
sQTL
hQTL
variant allelic effects
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart372012153
stomach4021119311
kidney29142161071
brain2916318212
primary cell
monocyte28618154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530143
B cell1710862
endothelial cell37115912
cell line
HeLa-S35553
A54921191181
H1-hESC1391118
K562723171
MCF-796251
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell191011011
adipocyte461641
embryonic stem cell1156
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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