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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 871candidate regulatory elements
  • binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2511September, 2022
  • 1035February, 2021
  • 389May, 2021
  • 371February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 127August, 2021
  • 127March, 2020
  • 106January, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 10October, 2022
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4429bed bed3+
  • 3576tsv
  • 869bed bed9
  • 546bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8965Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1130ChIP-Atlas
  • 639DGA
  • 533AMP
  • 421T1D
  • 406T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 37ENCODE
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4809tissue
  • 2249primary cell
  • 1561cell line
  • 388in vitro differentiated cells
  • 4stem cell
Organ
  • 2866vasculature
  • 2812blood vessel
  • 2791bodily fluid
  • 2783blood
  • 2651vein
  • 863epithelium
  • 561kidney
  • 409connective tissue
  • 400brain
  • 295musculature of body
  • 261pancreas
  • 241lung
  • 225intestine
  • 218heart
  • 194limb
  • 172embryo
  • 145skin of body
  • 141liver
  • 132large intestine
  • 117extraembryonic component
  • 94eye
  • 91stomach
  • 86adipose tissue
  • 74uterus
  • 70bone element
  • 69artery
  • 66small intestine
  • 61mammary gland
  • 59adrenal gland
  • 57placenta
  • 56prostate gland
  • 46ureter
  • 39penis
  • 39thymus
  • 38gonad
  • 37lymph node
  • 35esophagus
  • 33spinal cord
  • 24spleen
  • 22nerve
  • 20lymphatic vessel
  • 20lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 18testis
  • 17skeleton
  • 15mouth
  • 13pituitary gland
  • 12bronchus
  • 10bone marrow
  • 10breast
  • 9urinary bladder
  • 8tongue
  • 8vagina
  • 4nose
  • 3trachea
  • 1pericardium
Project
  • 8302AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5348hg19
  • 1903GRCh38
  • 3hg18
annotation_type!
  • binding sites
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

9013 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
histone modifications
chromatin state
accessible chromatin
candidate regulatory elements
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart2012151932
kidney142161014711
stomach2111931911
brain16318216121
primary cell
monocyte28618154121
CD8-positive, alpha-beta T cell530143
common myeloid progenitor, CD34-positive141313
endothelial cell711539122
B cell1086112
cell line
HeLa-S35533
A54919118118
H1-hESC3911118
K562231716
EndoC_BH1118831
in vitro differentiated cells
neural progenitor cell51541047
hematopoietic multipotent progenitor cell101101101
adipocyte616421
embryonic stem cell1156
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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