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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 876candidate regulatory elements
  • binding sites
  • 524target gene predictions
  • 186eQTL
  • 141variant allelic effects
  • 130differential activity
  • 84Fine-mapped variants
  • 15gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1695February, 2021
  • 846September, 2022
  • 333November, 2021
  • 306February, 2024
  • 299May, 2021
  • 289June, 2020
  • 155May, 2020
  • 116March, 2020
  • 115September, 2023
  • 106January, 2022
  • 74August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 26February, 2020
  • 19April, 2020
  • 15March, 2023
  • 14November, 2019
  • 14October, 2019
  • 10October, 2022
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 3597bed bed3+
  • 2903tsv
  • 869bed bed9
  • 546bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 7417Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1130ChIP-Atlas
  • 847ENCODE
  • 833EpiMap
  • 431DGA
  • 424AMP
  • 402T2DKP
  • 327T1D
  • 181BLUEPRINT
  • 1744DN
  • 130 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 4255tissue
  • 1586primary cell
  • 1330cell line
  • 288in vitro differentiated cells
  • 4stem cell
Organ
  • 2809vasculature
  • 2770blood vessel
  • 2761bodily fluid
  • 2756blood
  • 2650vein
  • 548epithelium
  • 314connective tissue
  • 312brain
  • 293kidney
  • 226musculature of body
  • 170intestine
  • 166pancreas
  • 161lung
  • 159heart
  • 145limb
  • 138embryo
  • 116skin of body
  • 103liver
  • 100large intestine
  • 84eye
  • 77extraembryonic component
  • 71stomach
  • 69uterus
  • 68adipose tissue
  • 53artery
  • 49bone element
  • 47mammary gland
  • 46small intestine
  • 44adrenal gland
  • 43prostate gland
  • 38placenta
  • 38ureter
  • 37penis
  • 34lymph node
  • 29esophagus
  • 29gonad
  • 26thymus
  • 24spinal cord
  • 20spleen
  • 17nerve
  • 15lymphatic vessel
  • 14ovary
  • 14testis
  • 14thyroid gland
  • 13lymphoid tissue
  • 12pituitary gland
  • 12skeleton
  • 10bronchus
  • 10mouth
  • 9bone marrow
  • 8breast
  • 5tongue
  • 5urinary bladder
  • 5vagina
  • 3trachea
  • 2nose
Project
  • 6925AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4504hg19
  • 1903GRCh38
  • 3hg18
annotation_type!
  • binding sites
software_used.software.name!
  • r
BIOSAMPLE
TYPE

7465 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
chromatin state
accessible chromatin
candidate regulatory elements
target gene predictions
eQTL
variant allelic effects
differential activity
Fine-mapped variants
gene expression
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart12151812
stomach11932121
kidney216101511
brain31821321
primary cell
monocyte861824121
CD8-positive, alpha-beta T cell301475
macrophage12339311
endothelial cell11537122
fibroblast163426
cell line
HeLa-S33252
H1-hESC11138
K562171117
A549118131
HFFc619
in vitro differentiated cells
neural progenitor cell1541011
hematopoietic multipotent progenitor cell11019
adipocyte16424
embryonic stem cell1561
dendritic cell6
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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