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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
histone modifications
chromatin state
913
accessible chromatin
817
binding sites
551
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1672
September, 2022
1667
February, 2021
349
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
270
May, 2021
152
May, 2020
128
March, 2020
106
January, 2022
94
October, 2022
86
August, 2021
83
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
44
November, 2022
30
March, 2024
27
February, 2023
19
April, 2020
14
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4894
bed bed3+
900
tsv
544
bigWig
txt
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5837
Homo sapiens
Biosample type
2050
tissue
1945
primary cell
1577
cell line
308
in vitro differentiated cells
3
stem cell
Organ
782
epithelium
482
kidney
378
connective tissue
346
brain
292
musculature of body
251
pancreas
236
lung
222
intestine
220
vasculature
196
heart
192
limb
176
embryo
167
blood vessel
166
bodily fluid
158
blood
156
skin of body
133
large intestine
121
liver
108
extraembryonic component
96
eye
94
stomach
78
adipose tissue
77
uterus
68
bone element
67
mammary gland
64
small intestine
60
artery
59
adrenal gland
58
prostate gland
54
placenta
51
ureter
50
lymph node
49
penis
41
gonad
38
esophagus
37
thymus
35
spinal cord
28
spleen
21
nerve
21
testis
19
ovary
19
thyroid gland
18
lymphatic vessel
18
lymphoid tissue
17
vein
15
mouth
15
skeleton
13
bronchus
12
pituitary gland
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
5178
AMP
333
ENCODE
281
KPMP
58
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5038
hg19
890
GRCh38
4
hg18
annotation_type!
caQTL
chromatin state
histone modifications
files.file_type!
csv
txt
BIOSAMPLE
TYPE
5885 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
tissue
heart
37
20
5
1
3
2
stomach
40
21
3
1
1
kidney
29
14
10
1
7
1
1
brain
29
16
2
1
1
2
1
lung
33
17
1
1
+ See 220 more…
primary cell
monocyte
2
18
1
15
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
15
2
6
1
2
B cell
14
10
6
2
fibroblast
4
16
1
2
6
+ See 401 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
8
A549
21
19
1
2
K562
7
23
1
2
EndoC_BH1
1
8
1
8
3
1
+ See 643 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
neural progenitor cell
5
5
10
7
adipocyte
4
6
4
1
1
cardiomyocytes
11
induced pluripotent stem cell
9
+ See 93 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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