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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1651
candidate regulatory elements
1343
target gene predictions
976
histone modifications
911
accessible chromatin
816
binding sites
eQTL
140
variant allelic effects
75
chromatin state
43
gene expression
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
2398
February, 2021
1656
September, 2022
332
November, 2021
304
February, 2024
292
May, 2021
288
June, 2020
151
May, 2020
94
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
48
March, 2020
48
May, 2022
44
November, 2022
35
August, 2017
26
February, 2023
19
April, 2020
16
February, 2020
13
November, 2019
12
March, 2023
9
August, 2018
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5862
bed bed3+
tsv
bed bed9
545
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5940
Homo sapiens
Biosample type
2141
cell line
1825
tissue
1660
primary cell
355
in vitro differentiated cells
4
stem cell
Organ
570
epithelium
335
connective tissue
320
kidney
316
brain
283
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
heart
175
limb
174
pancreas
165
skin of body
164
vasculature
137
large intestine
124
blood vessel
112
extraembryonic component
106
liver
98
eye
93
stomach
76
uterus
73
mammary gland
71
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
48
adipose tissue
46
artery
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
18
vein
17
ovary
17
thyroid gland
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
12
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
1
pericardium
Project
5567
AMP
332
ENCODE
58
T1D
19
LungMap
9
community
2
ITG
Genome assembly (visualization)
5916
hg19
792
GRCh38
1
hg18
annotation_type!
caQTL
eQTL
files.file_type!
bed bed9
tsv
organ_slims!
thymus
BIOSAMPLE
TYPE
5987 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
gene expression
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 760 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 216 more…
primary cell
monocyte
2
86
18
1
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
1
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
1
+ See 337 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
embryonic stem cell
1
1
6
1
mesenchymal stem cell
3
3
1
1
1
+ See 106 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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