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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
101
target gene predictions
83
candidate regulatory elements
43
chromatin state
17
accessible chromatin
14
binding sites
12
gene expression
12
histone modifications
3
Fine-mapped variants
eQTL
2
variant allelic effects
Date released
123
September, 2022
67
February, 2021
51
February, 2024
12
June, 2020
8
August, 2021
8
May, 2021
5
March, 2020
4
May, 2020
3
November, 2021
2
February, 2020
1
August, 2017
1
January, 2020
1
November, 2019
1
October, 2022
Available data
230
bed bed3+
42
bed bed9
15
tsv
5
bigWig
1
bigBed bed9
Organism
287
Homo sapiens
Biosample type
127
cell line
106
tissue
30
in vitro differentiated cells
23
primary cell
1
stem cell
Organ
944
epithelium
648
kidney
437
brain
437
connective tissue
366
musculature of body
310
lung
286
intestine
262
pancreas
257
vasculature
247
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
195
blood vessel
172
large intestine
147
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
68
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
284
AMP
3
ENCODE
Genome assembly (visualization)
275
hg19
101
GRCh38
annotation_type!
caQTL
eQTL
BIOSAMPLE
TYPE
287 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
cell line
H1-hESC
39
1
1
1
2
8
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 14 more…
tissue
thymus
14
20
11
1
1
1
tibial nerve
3
6
4
3
2
3
2
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
embryonic facial prominence
1
1
1
1
+ See 3 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
primary cell
trophoblast cell
5
7
4
1
1
primordial germ cell
1
1
fetal thymocyte
1
placental hematopoietic stem cell
1
trophoblast giant cell
1
stem cell
H1-hESC
1
See all biosamples
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