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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
271
gene expression
230
accessible chromatin
150
target gene predictions
149
candidate regulatory elements
98
differential activity
76
chromatin state
47
binding sites
45
variant allelic effects
31
histone modifications
19
eQTL
5
Fine-mapped variants
caQTL
2
sQTL
2
variant to gene
Date released
229
February, 2021
209
September, 2022
155
September, 2023
128
November, 2021
80
February, 2024
51
March, 2023
43
May, 2021
31
August, 2021
29
June, 2020
22
January, 2021
20
May, 2020
18
January, 2020
15
March, 2020
15
November, 2022
11
February, 2020
11
February, 2023
10
May, 2024
7
April, 2020
7
August, 2018
6
August, 2017
6
October, 2019
5
January, 2022
5
October, 2022
3
March, 2024
3
November, 2019
2
May, 2022
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
Available data
657
bed bed3+
351
tsv
189
bigWig
78
txt
69
bed bed9
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1125
Homo sapiens
Biosample type
843
primary cell
202
tissue
54
cell line
26
in vitro differentiated cells
Organ
957
epithelium
652
kidney
466
brain
466
connective tissue
373
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
157
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
811
AMP
155
KPMP
128
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
742
hg19
282
GRCh38
annotation_type!
caQTL
BIOSAMPLE
TYPE
1125 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
sQTL
variant to gene
primary cell
endothelial cell
9
15
7
3
2
2
1
1
hepatocyte
13
8
3
2
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 152 more…
tissue
islet of Langerhans
11
6
1
3
2
1
1
13
2
2
2
spleen
1
2
8
15
6
1
1
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
pigmented layer of retina
20
+ See 21 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
keratinocyte
3
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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