Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
1310
target gene predictions
970
histone modifications
chromatin state
845
accessible chromatin
810
binding sites
635
gene expression
156
eQTL
134
differential activity
128
variant allelic effects
69
Fine-mapped variants
13
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
representative DNase hypersensitivity sites
Date released
1729
February, 2021
826
September, 2022
351
May, 2021
345
February, 2024
313
November, 2021
286
September, 2023
284
June, 2020
146
May, 2020
120
August, 2021
119
March, 2020
102
January, 2022
101
October, 2022
79
January, 2020
62
February, 2020
44
November, 2022
36
January, 2021
31
February, 2023
30
March, 2024
23
March, 2023
18
April, 2020
15
May, 2022
11
November, 2019
3
November, 2020
3
October, 2019
3
September, 2018
2
August, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
January, 2018
1
July, 2020
Available data
4071
bed bed3+
823
tsv
485
bigWig
108
txt
21
csv
2
bigBed narrowPeak
Organism
5041
Homo sapiens
Biosample type
1810
primary cell
1807
cell line
1124
tissue
343
in vitro differentiated cells
3
stem cell
Organ
796
epithelium
416
kidney
332
connective tissue
283
brain
pancreas
183
vasculature
155
musculature of body
144
bodily fluid
139
blood
137
blood vessel
134
heart
130
embryo
117
intestine
116
liver
109
lung
100
limb
94
skin of body
82
eye
70
uterus
69
large intestine
60
adipose tissue
57
artery
54
extraembryonic component
49
bone element
44
mammary gland
44
stomach
38
prostate gland
33
lymph node
31
adrenal gland
28
placenta
27
small intestine
26
penis
25
gonad
21
esophagus
20
ureter
19
spinal cord
18
thymus
15
lymphatic vessel
15
nerve
13
pituitary gland
13
spleen
13
testis
12
vein
11
ovary
11
skeleton
11
thyroid gland
bronchus
10
lymphoid tissue
9
bone marrow
7
mouth
6
breast
5
trachea
5
urinary bladder
4
tongue
4
vagina
2
nose
1
pericardium
Project
4423
AMP
313
ENCODE
281
KPMP
40
T1D
18
LungMap
9
community
5
ITG
Genome assembly (visualization)
4194
hg19
952
GRCh38
4
hg18
annotation_type!
candidate regulatory elements
chromatin state
representative DNase hypersensitivity sites
organ_slims!
bronchus
pancreas
BIOSAMPLE
TYPE
5089 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
meQTL
other
pQTL
sQTL
variant to gene
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
5
30
4
3
endothelial cell
7
1
15
2
9
1
2
2
hepatocyte
3
4
8
1
13
2
fibroblast
4
16
1
2
6
+ See 420 more…
cell line
HeLa-S3
55
1
H1-hESC
39
1
1
2
8
K562
23
1
1
2
A549
19
1
1
2
breast cancer cell
11
9
+ See 734 more…
tissue
kidney
14
2
10
1
7
1
1
heart
20
1
5
1
3
2
retina
3
1
23
1
1
1
1
liver
10
2
4
1
1
7
1
1
stomach
21
1
3
1
1
+ See 240 more…
in vitro differentiated cells
neural progenitor cell
5
15
10
7
hematopoietic multipotent progenitor cell
10
1
1
1
1
adipocyte
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 113 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download