Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
15
target gene predictions
13
chromatin state
8
binding sites
7
histone modifications
5
accessible chromatin
1
eQTL
1
gene expression
1
variant allelic effects
Date released
26
September, 2022
15
February, 2021
5
June, 2020
2
May, 2021
1
February, 2024
1
January, 2022
1
March, 2024
Available data
36
bed bed3+
13
bed bed9
1
tsv
Organism
51
Homo sapiens
Biosample type
34
cell line
11
tissue
6
primary cell
Organ
754
epithelium
437
kidney
359
connective tissue
349
brain
225
musculature of body
217
pancreas
197
vasculature
185
heart
179
lung
172
intestine
169
bodily fluid
162
blood
157
embryo
152
blood vessel
150
limb
128
skin of body
126
liver
102
large intestine
91
eye
87
extraembryonic component
74
uterus
67
stomach
66
adipose tissue
64
bone element
63
artery
58
mammary gland
51
prostate gland
46
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
testis
16
vein
15
lymphatic vessel
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
51
AMP
Genome assembly (visualization)
49
hg19
14
GRCh38
annotation_type!
candidate regulatory elements
differential activity
month_released!
August, 2017
BIOSAMPLE
TYPE
51 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
variant allelic effects
cell line
22Rv1
2
2
1
1
PC-3
1
1
1
1
1
RWPE1
1
1
1
1
1
LNCAP
1
1
1
1
LNCaP clone FGC
2
2
+ See 4 more…
tissue
prostate gland
2
2
2
2
1
1
prostate
1
primary cell
epithelial cell of prostate
3
2
luminal epithelial cell of prostatic duct
1
See all biosamples
Download