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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
182
accessible chromatin
120
target gene predictions
candidate regulatory elements
92
differential activity
51
chromatin state
41
binding sites
40
variant allelic effects
26
histone modifications
eQTL
2
caQTL
Date released
155
September, 2023
141
February, 2021
126
November, 2021
99
September, 2022
73
February, 2024
38
March, 2023
34
May, 2021
23
August, 2021
23
June, 2020
20
January, 2021
14
May, 2020
13
January, 2020
8
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
5
October, 2022
3
August, 2017
2
February, 2023
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
408
bed bed3+
324
tsv
159
bigWig
78
txt
48
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
807
Homo sapiens
Biosample type
720
primary cell
42
cell line
27
tissue
18
in vitro differentiated cells
Organ
846
epithelium
489
kidney
359
connective tissue
326
brain
238
pancreas
222
musculature of body
210
vasculature
179
heart
179
lung
173
intestine
169
bodily fluid
162
blood
159
blood vessel
158
embryo
145
limb
126
skin of body
125
liver
103
large intestine
eye
86
extraembryonic component
73
uterus
67
stomach
64
bone element
60
artery
59
mammary gland
57
adipose tissue
50
prostate gland
46
small intestine
44
adrenal gland
43
placenta
41
lymph node
36
penis
33
ureter
gonad
29
thymus
25
esophagus
25
spinal cord
18
spleen
17
lymphatic vessel
17
nerve
17
vein
15
lymphoid tissue
15
testis
14
ovary
14
skeleton
14
thyroid gland
12
bronchus
12
pituitary gland
11
bone marrow
10
mouth
7
breast
7
urinary bladder
6
tongue
5
trachea
5
vagina
3
nose
1
pericardium
Project
497
AMP
155
KPMP
126
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
458
hg19
230
GRCh38
annotation_type!
candidate regulatory elements
eQTL
organ_slims!
eye
gonad
BIOSAMPLE
TYPE
807 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
2
hepatocyte
13
8
3
1
1
2
4
epithelial cell of proximal tubule
16
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
+ See 141 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
+ See 6 more…
tissue
breast epithelium
1
3
2
esophagus squamous epithelium
1
2
2
kidney epithelium
1
1
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 11 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 3 more…
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