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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
111
accessible chromatin
107
target gene predictions
gene expression
72
chromatin state
45
binding sites
37
histone modifications
31
eQTL
19
variant allelic effects
18
differential activity
12
Fine-mapped variants
3
caQTL
2
pQTL
Date released
126
September, 2022
58
February, 2021
54
November, 2021
33
February, 2024
26
June, 2020
20
August, 2021
18
March, 2020
17
May, 2021
14
October, 2022
12
May, 2020
10
August, 2017
10
January, 2020
9
March, 2023
8
January, 2022
8
September, 2023
7
November, 2022
5
May, 2022
4
February, 2020
3
April, 2020
3
September, 2018
2
January, 2021
2
May, 2024
2
November, 2020
2
October, 2019
1
February, 2023
1
June, 2021
1
November, 2019
Available data
334
bed bed3+
67
bigWig
62
bed bed9
36
tsv
3
bigBed bed9
1
bam
1
bigBed narrowPeak
Organism
457
Homo sapiens
Biosample type
240
primary cell
122
tissue
51
cell line
43
in vitro differentiated cells
1
stem cell
Organ
596
epithelium
336
brain
331
connective tissue
291
kidney
218
musculature of body
205
pancreas
180
vasculature
179
lung
173
intestine
170
bodily fluid
164
heart
163
blood
148
embryo
145
limb
140
blood vessel
127
skin of body
109
liver
103
large intestine
90
eye
87
extraembryonic component
72
uterus
66
stomach
60
bone element
59
mammary gland
57
adipose tissue
57
artery
50
prostate gland
47
small intestine
44
adrenal gland
44
placenta
41
lymph node
36
penis
33
ureter
31
gonad
29
thymus
26
esophagus
26
spinal cord
18
spleen
17
nerve
16
testis
16
vein
14
lymphatic vessel
14
lymphoid tissue
14
ovary
14
skeleton
14
thyroid gland
12
bronchus
12
pituitary gland
11
bone marrow
10
mouth
7
breast
6
urinary bladder
5
tongue
5
trachea
5
vagina
3
nose
Project
386
AMP
54
ENCODE
6
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
423
hg19
183
GRCh38
4
hg18
annotation_type!
candidate regulatory elements
gene expression
BIOSAMPLE
TYPE
457 results
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Clear Filters
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
10
1
hepatocyte
8
3
1
1
4
2
osteoblast
5
2
1
3
2
endothelial cell of hepatic sinusoid
6
6
+ See 41 more…
tissue
liver
4
10
9
1
2
7
1
1
adipose tissue
2
8
6
1
4
1
spinal cord
1
8
7
1
subcutaneous adipose tissue
2
1
6
1
1
3
omental fat pad
2
2
2
2
3
+ See 9 more…
cell line
HepG2
2
3
2
3
5
GM23248
1
1
1
1
1
HuH-7
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
spinal cord
1
2
+ See 11 more…
in vitro differentiated cells
adipocyte
4
6
6
1
1
mesenchymal stem cell
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
hepatocyte
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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