Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
472
gene expression
467
accessible chromatin
367
target gene predictions
candidate regulatory elements
207
histone modifications
152
differential activity
95
binding sites
78
variant allelic effects
44
eQTL
33
chromatin state
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
322
November, 2021
282
February, 2021
281
September, 2023
256
May, 2021
165
September, 2022
137
February, 2024
85
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
37
January, 2022
37
May, 2022
28
October, 2022
20
January, 2020
19
April, 2020
15
February, 2020
9
August, 2018
9
November, 2022
6
August, 2017
5
March, 2020
5
October, 2019
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1230
bed bed3+
591
tsv
398
bigWig
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1891
Homo sapiens
Biosample type
1936
primary cell
1838
cell line
1123
tissue
349
in vitro differentiated cells
4
stem cell
Organ
689
epithelium
284
kidney
208
connective tissue
126
pancreas
121
vasculature
82
blood vessel
59
liver
45
skin of body
musculature of body
26
mammary gland
23
artery
23
intestine
22
brain
22
heart
21
lung
19
extraembryonic component
14
eye
14
penis
11
adrenal gland
11
bone element
11
embryo
11
lymphatic vessel
11
stomach
10
bone marrow
10
bronchus
10
vein
7
esophagus
7
placenta
6
large intestine
5
blood
5
bodily fluid
5
trachea
5
uterus
4
gonad
4
prostate gland
4
small intestine
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
mouth
1
pericardium
1
spinal cord
1
testis
1
thymus
Project
1253
AMP
322
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1269
hg19
531
GRCh38
annotation_type!
candidate regulatory elements
representative DNase hypersensitivity sites
files.file_type!
bed bed9
organ_slims!
musculature of body
BIOSAMPLE
TYPE
1936 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
histone modifications
differential activity
binding sites
variant allelic effects
eQTL
chromatin state
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
3
4
5
30
1
endothelial cell
9
15
7
1
2
2
1
2
hepatocyte
13
8
3
4
1
2
fibroblast
16
4
1
6
2
+ See 435 more…
See all biosamples
Download