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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
44
target gene predictions
37
chromatin state
27
accessible chromatin
24
gene expression
14
histone modifications
13
binding sites
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
70
September, 2022
29
February, 2024
17
February, 2021
11
March, 2020
10
August, 2021
9
November, 2021
6
June, 2020
4
August, 2017
4
March, 2023
4
May, 2021
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
105
bed bed3+
33
bed bed9
28
tsv
25
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
180
Homo sapiens
Biosample type
86
tissue
65
primary cell
24
cell line
5
in vitro differentiated cells
Organ
849
epithelium
493
kidney
380
connective tissue
354
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
171
AMP
9
ENCODE
Genome assembly (visualization)
147
hg19
84
GRCh38
2
hg18
annotation_type!
candidate regulatory elements
representative DNase hypersensitivity sites
BIOSAMPLE
TYPE
180 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
liver
10
9
4
1
2
1
7
1
1
small intestine
17
15
1
1
right lobe of liver
1
1
1
1
3
duodenal mucosa
2
3
muscle layer of duodenum
2
2
primary cell
hepatocyte
3
1
8
13
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
3
1
1
1
pancreatic endothelial cell
1
3
enterocyte of epithelium of small intestine
1
1
+ See 2 more…
cell line
HepG2
3
2
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte(AFP)
3
hepatocyte
1
1
See all biosamples
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