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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
84
accessible chromatin
candidate regulatory elements
74
target gene predictions
46
gene expression
45
chromatin state
30
binding sites
23
histone modifications
21
eQTL
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
74
September, 2022
66
February, 2021
47
November, 2021
18
June, 2020
17
September, 2023
15
May, 2021
12
October, 2022
11
August, 2021
11
February, 2024
10
January, 2020
9
March, 2020
7
August, 2017
7
February, 2020
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2020
Available data
224
bed bed3+
64
tsv
53
bigWig
38
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
347
Homo sapiens
Biosample type
212
primary cell
73
tissue
40
in vitro differentiated cells
21
cell line
1
stem cell
Organ
808
epithelium
477
kidney
364
connective tissue
338
brain
242
pancreas
222
musculature of body
201
vasculature
179
lung
heart
173
intestine
171
bodily fluid
164
blood
158
embryo
156
blood vessel
142
limb
129
liver
128
skin of body
105
large intestine
89
eye
87
extraembryonic component
uterus
67
adipose tissue
66
stomach
64
bone element
61
artery
58
mammary gland
50
prostate gland
47
small intestine
44
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
30
ureter
29
thymus
27
spinal cord
26
esophagus
19
spleen
17
lymphatic vessel
17
nerve
17
testis
16
vein
15
lymphoid tissue
15
ovary
14
skeleton
14
thyroid gland
13
pituitary gland
11
bone marrow
11
bronchus
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
274
AMP
47
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
278
hg19
116
GRCh38
2
hg18
annotation_type!
candidate regulatory elements
variant allelic effects
organ_slims!
heart
uterus
BIOSAMPLE
TYPE
347 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
pericyte cell
10
10
1
osteoblast
5
2
2
1
3
2
fibroblast of lung
4
4
2
foreskin fibroblast
1
2
1
4
2
+ See 40 more…
tissue
adipose tissue
2
8
3
6
1
4
subcutaneous adipose tissue
2
5
1
6
1
3
omental fat pad
2
2
2
2
2
3
cartilage tissue
1
2
2
bone tissue
4
+ See 5 more…
in vitro differentiated cells
adipocyte
4
6
1
6
1
1
mesenchymal stem cell
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 5 more…
cell line
GM23248
1
1
1
1
1
HT1080
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
foreskin fibroblast
1
1
+ See 6 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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