Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
518
target gene predictions
109
gene expression
108
accessible chromatin
89
histone modifications
48
variant allelic effects
36
binding sites
32
eQTL
20
chromatin state
5
differential activity
variant to gene
3
pQTL
2
Fine-mapped variants
2
sQTL
1
caQTL
1
other
Date released
459
September, 2022
155
February, 2021
63
June, 2020
50
May, 2020
37
August, 2021
32
March, 2020
31
May, 2021
27
March, 2024
24
February, 2023
23
February, 2020
19
August, 2017
19
January, 2020
17
November, 2022
8
February, 2024
4
March, 2023
2
January, 2018
2
May, 2022
1
April, 2019
Available data
816
bed bed3+
112
tsv
29
bigWig
4
bigBed bed9
1
bam
Organism
973
Homo sapiens
Biosample type
1555
cell line
1431
primary cell
974
tissue
326
in vitro differentiated cells
4
stem cell
Organ
140
brain
94
kidney
93
musculature of body
75
intestine
72
heart
67
limb
58
pancreas
53
eye
51
connective tissue
49
lung
44
large intestine
42
adipose tissue
38
epithelium
33
stomach
31
extraembryonic component
28
liver
27
blood vessel
27
vasculature
23
small intestine
19
adrenal gland
19
placenta
17
thymus
17
ureter
15
embryo
15
gonad
13
artery
11
esophagus
11
spleen
10
spinal cord
9
skin of body
8
nerve
8
ovary
8
prostate gland
8
uterus
7
bone element
7
testis
7
thyroid gland
6
lymphoid tissue
5
breast
5
urinary bladder
4
bodily fluid
4
mouth
4
tongue
blood
3
skeleton
3
vagina
2
mammary gland
2
penis
2
pituitary gland
1
vein
Project
969
AMP
5
ITG
Genome assembly (visualization)
1517
hg19
GRCh38
3
hg18
annotation_type!
candidate regulatory elements
variant to gene
assembly!
GRCh38
organ_slims!
blood
BIOSAMPLE
TYPE
974 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
gene expression
accessible chromatin
histone modifications
variant allelic effects
binding sites
eQTL
chromatin state
differential activity
pQTL
Fine-mapped variants
sQTL
caQTL
other
tissue
islet of Langerhans
1
11
2
1
1
2
10
3
2
2
heart
20
3
2
1
2
1
retina
3
1
22
1
1
1
kidney
14
7
1
2
1
1
1
liver
10
1
2
2
1
6
2
1
1
+ See 223 more…
See all biosamples
Download