Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
15
target gene predictions
13
chromatin state
8
binding sites
7
histone modifications
5
accessible chromatin
1
eQTL
1
gene expression
1
variant allelic effects
Date released
26
September, 2022
15
February, 2021
5
June, 2020
2
May, 2021
1
February, 2024
1
January, 2022
1
March, 2024
Available data
36
bed bed3+
13
bed bed9
1
tsv
Organism
51
Homo sapiens
Biosample type
34
cell line
11
tissue
6
primary cell
Organ
847
epithelium
491
kidney
376
connective tissue
349
brain
251
pancreas
226
musculature of body
208
vasculature
180
lung
intestine
175
heart
171
bodily fluid
164
blood
158
embryo
157
blood vessel
146
limb
130
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
68
stomach
67
adipose tissue
64
bone element
63
artery
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
spleen
18
nerve
17
lymphatic vessel
17
testis
15
lymphoid tissue
15
ovary
15
thyroid gland
15
vein
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
51
AMP
Genome assembly (visualization)
49
hg19
14
GRCh38
annotation_type!
candidate regulatory elements
assembly!
hg18
files.file_type!
bigBed bed9
organ_slims!
intestine
BIOSAMPLE
TYPE
51 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
variant allelic effects
cell line
22Rv1
2
2
1
1
PC-3
1
1
1
1
1
RWPE1
1
1
1
1
1
LNCAP
1
1
1
1
LNCaP clone FGC
2
2
+ See 4 more…
tissue
prostate gland
2
2
2
2
1
1
prostate
1
primary cell
epithelial cell of prostate
3
2
luminal epithelial cell of prostatic duct
1
See all biosamples
Download