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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • candidate regulatory elements
  • 1246target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 691accessible chromatin
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1753February, 2021
  • 1679September, 2022
  • 389May, 2021
  • 376February, 2024
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4042bed bed3+
  • 3576tsv
  • 869bed bed9
  • 324bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8578Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 646DGA
  • 421T1D
  • 281KPMP
  • 219BLUEPRINT
  • 201AMP
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 128ENCODE
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 73T2DKP
  • 67HPAP
  • 43STARNET
  • 12ROADMAP
Biosample type
  • 4386tissue
  • 2025cell line
  • 1818primary cell
  • 391in vitro differentiated cells
  • 4stem cell
Organ
  • 2854vasculature
  • 2812bodily fluid
  • 2806blood vessel
  • 2805blood
  • 2652vein
  • 722epithelium
  • 490kidney
  • 356brain
  • 342connective tissue
  • 235pancreas
  • 223musculature of body
  • 175heart
  • 171lung
  • 157intestine
  • 156embryo
  • 150limb
  • 133liver
  • 119skin of body
  • 99large intestine
  • 87eye
  • 84extraembryonic component
  • 80adipose tissue
  • 72uterus
  • 69artery
  • 63bone element
  • 59stomach
  • 53mammary gland
  • 51prostate gland
  • 43small intestine
  • 42placenta
  • 41lymph node
  • 36penis
  • 35adrenal gland
  • 33ureter
  • 31gonad
  • 28thymus
  • 27spinal cord
  • 24esophagus
  • 19nerve
  • 19spleen
  • 17testis
  • 15lymphoid tissue
  • 14lymphatic vessel
  • 14skeleton
  • 13ovary
  • 13pituitary gland
  • 13thyroid gland
  • 11mouth
  • 10bone marrow
  • 10bronchus
  • 8breast
  • 7urinary bladder
  • 6tongue
  • 6vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 8248AMP
  • ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4960hg19
  • 1538GRCh38
  • 4hg18
annotation_type!
  • candidate regulatory elements
award.project!
  • ENCODE
BIOSAMPLE
TYPE

8626 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
histone modifications
chromatin state
binding sites
accessible chromatin
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart201211532
kidney14216110711
stomach21119311
brain1631812121
cell line
HeLa-S35531
H1-hESC3911218
A5491911821
K562231721
EndoC_BH11118831
primary cell
monocyte286118154121
CD8-positive, alpha-beta T cell430133
hepatocyte24117132
common myeloid progenitor, CD34-positive1413
B cell10832
in vitro differentiated cells
neural progenitor cell5154107
hematopoietic multipotent progenitor cell10110111
adipocyte616141
embryonic stem cell11516
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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