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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
51
target gene predictions
44
chromatin state
11
accessible chromatin
9
binding sites
6
histone modifications
5
eQTL
4
gene expression
Date released
82
September, 2022
13
February, 2021
11
June, 2020
6
May, 2021
5
January, 2022
4
March, 2024
3
August, 2017
2
February, 2024
2
March, 2020
2
October, 2022
Available data
80
bed bed3+
41
bed bed9
4
tsv
Organism
130
Homo sapiens
Biosample type
99
tissue
29
cell line
2
primary cell
Organ
538
epithelium
354
brain
350
kidney
303
connective tissue
218
musculature of body
213
pancreas
175
heart
172
vasculature
171
bodily fluid
168
lung
164
blood
157
intestine
155
embryo
150
limb
140
blood vessel
128
liver
119
skin of body
99
large intestine
87
eye
84
extraembryonic component
72
uterus
70
adipose tissue
61
bone element
60
artery
59
stomach
53
mammary gland
51
prostate gland
43
small intestine
42
placenta
41
lymph node
36
penis
35
adrenal gland
33
ureter
31
gonad
28
thymus
27
spinal cord
24
esophagus
19
nerve
19
spleen
17
testis
17
vein
15
lymphoid tissue
14
skeleton
13
ovary
13
pituitary gland
13
thyroid gland
11
mouth
9
bronchus
8
bone marrow
8
breast
8
lymphatic vessel
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
130
AMP
8
ENCODE
Genome assembly (visualization)
121
hg19
48
GRCh38
annotation_type!
candidate regulatory elements
biosample_type!
stem cell
BIOSAMPLE
TYPE
130 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
14
13
1
1
ovary
6
4
1
1
1
sigmoid colon
7
5
1
testis
3
3
1
1
1
1
1
transverse colon
5
4
1
1
+ See 8 more…
cell line
HT-29
2
1
1
1
1
NT2-D1 cell
1
1
1
2
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
+ See 2 more…
primary cell
Leydig cell
1
somatic gonadal cell
1
See all biosamples
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