Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2874target gene predictions
  • 2636pQTL
  • candidate regulatory elements
  • 977histone modifications
  • 944chromatin state
  • 916accessible chromatin
  • 811binding sites
  • 459gene expression
  • 363differential activity
  • 160eQTL
  • 140variant allelic effects
  • 74Fine-mapped variants
  • 6caQTL
  • 5hQTL
  • 5sQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 1984July, 2026
  • 1746February, 2021
  • 1679September, 2022
  • 389May, 2021
  • 320May, 2026
  • 317February, 2024
  • 289June, 2020
  • 155May, 2020
  • 128March, 2020
  • 106January, 2022
  • 94October, 2022
  • 89January, 2020
  • 77August, 2021
  • 64February, 2020
  • 61March, 2023
  • 43May, 2022
  • 41November, 2022
  • 35August, 2017
  • 31February, 2023
  • 30March, 2024
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5877bed bed3+
  • 3206tsv
  • 869bed bed9
  • 243bigWig
  • 83txt
  • 40bigBed bed9
  • 34bed bed9+
  • 24csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10334Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 1458ENCODE-rE2G
  • 528DGA
  • 393HDMA
  • 362T1D
  • 320pyxis
  • 219BLUEPRINT
  • 1744DN
  • 174AMP
  • 151GTEx
  • 133CATlas
  • 122ENCODE
  • 113 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 88CMDGA
  • 68T2DKP
  • 67HPAP
  • 12ROADMAP
Biosample type
  • 4990tissue
  • 2736primary cell
  • 2223cell line
  • 428in vitro differentiated cells
  • 3stem cell
Organ
  • 3322blood
  • 2806bodily fluid
  • 2792vasculature
  • 2781blood vessel
  • 2653vein
  • 789brain
  • 489epithelium
  • 419kidney
  • 380heart
  • 347connective tissue
  • 297lung
  • 255pancreas
  • 226intestine
  • 211skin of body
  • 203musculature of body
  • 176liver
  • 156embryo
  • 151large intestine
  • 150limb
  • 139eye
  • 123adipose tissue
  • 112extraembryonic component
  • 111muscle organ
  • 82uterus
  • 80stomach
  • 76bone element
  • 73artery
  • 72thymus
  • 70mammary gland
  • 66placenta
  • 64adrenal gland
  • 60__MARKER__
  • 60prostate gland
  • 56small intestine
  • 48spleen
  • 45gonad
  • 42ureter
  • 41lymph node
  • 37thyroid gland
  • 36penis
  • 33spinal cord
  • 27esophagus
  • 22ovary
  • 22testis
  • 19nerve
  • 18skeleton
  • 15lymphoid tissue
  • 13mouth
  • 13pituitary gland
  • 10breast
  • 10urinary bladder
  • 9bronchus
  • 8bone marrow
  • 8lymphatic vessel
  • 8tongue
  • 8vagina
  • 5trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 10381AMP
Genome assembly (visualization)
  • 4797hg19
  • 3482GRCh38
  • 4hg18
annotation_type!
  • candidate regulatory elements
BIOSAMPLE
TYPE

10381 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
head of caudate nucleus86
heart381215132
stomach42119311
dorsolateral prefrontal cortex5711
primary cell
monocyte1861711544211
fibroblast242411026
T-cell64
CD8-positive, alpha-beta T cell2530122
endothelial cell1019252521
cell line
HeLa-S35931
A5493311812
H1-hESC3911128
K562301712
MCF-7132513
in vitro differentiated cells
neural progenitor cell6154107
hematopoietic multipotent progenitor cell22110111
adipocyte716411
embryonic stem cell11551
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego