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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
19
target gene predictions
17
accessible chromatin
candidate regulatory elements
5
binding sites
5
chromatin state
5
variant allelic effects
4
histone modifications
Date released
23
November, 2021
10
September, 2022
8
February, 2021
7
February, 2024
4
June, 2020
2
May, 2021
1
October, 2022
Available data
50
bed bed3+
13
bigWig
5
bed bed9
Organism
55
Homo sapiens
Biosample type
tissue
31
primary cell
24
cell line
Organ
799
epithelium
321
kidney
304
connective tissue
167
bodily fluid
161
blood
159
pancreas
150
vasculature
136
embryo
114
skin of body
99
blood vessel
90
liver
87
brain
87
lung
64
uterus
58
musculature of body
57
mammary gland
47
intestine
46
bone element
41
lymph node
40
prostate gland
35
heart
34
penis
32
extraembryonic component
31
eye
30
large intestine
29
artery
17
lymphatic vessel
16
vein
12
bronchus
11
adrenal gland
11
bone marrow
11
stomach
10
pituitary gland
10
placenta
9
gonad
8
esophagus
6
limb
6
testis
5
adipose tissue
5
lymphoid tissue
5
spinal cord
5
trachea
mouth
4
small intestine
3
nose
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
32
AMP
23
ENCODE
Genome assembly (visualization)
55
hg19
30
GRCh38
annotation_type!
candidate regulatory elements
biosample_type!
tissue
organ_slims!
mouth
BIOSAMPLE
TYPE
55 results
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Clear Filters
target gene predictions
accessible chromatin
binding sites
chromatin state
variant allelic effects
histone modifications
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
epithelial cell of esophagus
1
1
2
smooth muscle cell of the esophagus
2
2
+ See 4 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 1 more…
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