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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
gene expression
56
differential activity
23
accessible chromatin
candidate regulatory elements
9
chromatin state
9
target gene predictions
6
variant allelic effects
1
binding sites
Date released
140
September, 2023
February, 2021
20
August, 2021
18
September, 2022
7
February, 2020
7
January, 2020
6
May, 2020
5
June, 2020
3
November, 2021
1
October, 2022
Available data
152
tsv
36
bed bed3+
18
bigWig
12
txt
9
bed bed9
Organism
207
Homo sapiens
Biosample type
207
primary cell
157
tissue
24
cell line
1
in vitro differentiated cells
Organ
613
epithelium
207
kidney
202
connective tissue
127
vasculature
119
pancreas
85
blood vessel
55
skin of body
54
liver
39
musculature of body
27
mammary gland
26
brain
25
lung
24
extraembryonic component
22
heart
22
intestine
19
artery
16
penis
15
eye
13
embryo
13
lymphatic vessel
13
vein
11
adrenal gland
stomach
9
bronchus
8
esophagus
7
bone element
7
bone marrow
6
large intestine
6
placenta
6
prostate gland
4
gonad
4
small intestine
3
thyroid gland
3
uterus
2
mouth
2
ovary
2
spinal cord
1
adipose tissue
1
blood
1
bodily fluid
1
limb
1
pericardium
1
testis
1
thymus
1
trachea
Project
140
KPMP
64
AMP
3
ENCODE
Genome assembly (visualization)
45
hg19
19
GRCh38
annotation_type!
candidate regulatory elements
month_released!
February, 2021
organ_slims!
stomach
BIOSAMPLE
TYPE
207 results
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gene expression
differential activity
accessible chromatin
chromatin state
target gene predictions
variant allelic effects
binding sites
primary cell
epithelial cell of proximal tubule
2
1
1
1
1
1
glomerular endothelial cell
2
2
1
1
1
kidney tubule cell
1
2
2
2
kidney glomerular epithelial cell
1
2
1
1
1
renal cortical epithelial cell
1
2
1
1
1
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