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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • candidate regulatory elements
  • 1236accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 685gene expression
  • 484differential activity
  • 180eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 1984July, 2026
  • 1753February, 2021
  • 1679September, 2022
  • 389May, 2021
  • 371February, 2024
  • 333November, 2021
  • 320May, 2026
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 21July, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 6359bed bed3+
  • 3551tsv
  • 869bed bed9
  • 546bigWig
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 12bed bed3
  • bed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 11194Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 1458ENCODE-rE2G
  • 646DGA
  • 534AMP
  • 421T1D
  • 406T2DKP
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 219BLUEPRINT
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 133CATlas
  • 128ENCODE
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 12ROADMAP
Biosample type
  • 5014tissue
  • 3555primary cell
  • 2232cell line
  • 435in vitro differentiated cells
  • 4stem cell
Organ
  • 3322blood
  • 2852vasculature
  • 2822blood vessel
  • 2806bodily fluid
  • 2653vein
  • 851epithelium
  • 792brain
  • 597kidney
  • 437connective tissue
  • 392heart
  • 309lung
  • 295pancreas
  • 245intestine
  • 236musculature of body
  • 221skin of body
  • 205liver
  • 158embryo
  • 157large intestine
  • 150limb
  • 143eye
  • 123adipose tissue
  • 115extraembryonic component
  • 111muscle organ
  • 89stomach
  • 84uterus
  • 81bone element
  • 78artery
  • 76mammary gland
  • 74adrenal gland
  • 73thymus
  • 68placenta
  • 60__MARKER__
  • 60prostate gland
  • 60small intestine
  • 48spleen
  • 47gonad
  • 42ureter
  • 41lymph node
  • 39thyroid gland
  • 36penis
  • 33spinal cord
  • 31esophagus
  • 24ovary
  • 22testis
  • 20skeleton
  • 19nerve
  • 17lymphatic vessel
  • 15lymphoid tissue
  • 13mouth
  • 13pituitary gland
  • 12bronchus
  • 11bone marrow
  • 10breast
  • 10urinary bladder
  • 8tongue
  • 8vagina
  • 5trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 10527AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5293hg19
  • 3855GRCh38
  • 4hg18
annotation_type!
  • candidate regulatory elements
files.file_type!
  • bed narrowPeak
BIOSAMPLE
TYPE

11242 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
accessible chromatin
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
head of caudate nucleus86
heart3851211412
stomach42311911
kidney28102161711
primary cell
monocyte2188611544121
fibroblast284011026
endothelial cell172312925223
macrophage1321217832
CD8-positive, alpha-beta T cell2743013
cell line
HeLa-S35931
A5493311182
H1-hESC3911128
K562301172
MCF-7131253
in vitro differentiated cells
neural progenitor cell6101547
hematopoietic multipotent progenitor cell22111011
adipocyte741611
embryonic stem cell16151
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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