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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
5
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
66
September, 2022
10
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
2
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
October, 2022
Available data
67
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
104
Homo sapiens
Biosample type
75
tissue
23
cell line
6
primary cell
Organ
815
epithelium
477
kidney
357
connective tissue
320
brain
235
pancreas
221
musculature of body
196
vasculature
176
lung
175
intestine
173
heart
157
embryo
152
blood vessel
152
bodily fluid
145
blood
143
limb
129
liver
125
skin of body
104
large intestine
87
eye
86
extraembryonic component
73
uterus
68
stomach
66
adipose tissue
63
bone element
60
artery
56
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
43
placenta
39
lymph node
34
penis
32
gonad
30
ureter
29
thymus
28
esophagus
25
spinal cord
19
spleen
18
nerve
17
lymphatic vessel
16
testis
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
14
vein
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
98
AMP
6
ENCODE
Genome assembly (visualization)
100
hg19
43
GRCh38
annotation_type!
candidate regulatory elements
files.file_type!
bigBed narrowPeak
month_released!
January, 2020
October, 2022
BIOSAMPLE
TYPE
104 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
14
13
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
colonic mucosa
2
3
1
mucosa of rectum
2
3
+ See 6 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT116
3
1
HCT-116 cell
1
1
1
RKO
1
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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