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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
target gene predictions
83
chromatin state
candidate regulatory elements
29
accessible chromatin
5
gene expression
5
variant allelic effects
4
eQTL
1
binding sites
Date released
156
September, 2022
28
November, 2021
February, 2021
13
June, 2020
8
May, 2021
7
February, 2024
5
August, 2017
5
March, 2024
4
January, 2022
3
March, 2020
1
October, 2022
Available data
143
bed bed3+
78
bed bed9
16
bigWig
5
tsv
Organism
230
Homo sapiens
Biosample type
180
tissue
33
primary cell
17
cell line
Organ
705
epithelium
389
kidney
311
connective tissue
296
brain
233
pancreas
215
musculature of body
193
vasculature
171
heart
171
lung
163
intestine
149
blood vessel
140
limb
135
embryo
119
bodily fluid
116
liver
114
blood
102
skin of body
95
large intestine
83
eye
80
extraembryonic component
69
uterus
67
stomach
58
adipose tissue
54
artery
47
small intestine
45
adrenal gland
45
mammary gland
39
bone element
39
placenta
36
prostate gland
33
ureter
30
gonad
28
esophagus
lymph node
27
thymus
26
penis
26
spinal cord
19
nerve
18
spleen
15
ovary
15
thyroid gland
14
lymphatic vessel
14
lymphoid tissue
14
testis
14
vein
12
pituitary gland
11
mouth
9
bronchus
8
breast
7
bone marrow
7
urinary bladder
6
skeleton
6
tongue
6
vagina
3
nose
1
pericardium
1
trachea
Project
202
AMP
28
ENCODE
Genome assembly (visualization)
221
hg19
112
GRCh38
annotation_type!
candidate regulatory elements
month_released!
February, 2021
organ_slims!
lymph node
BIOSAMPLE
TYPE
230 results
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target gene predictions
chromatin state
accessible chromatin
gene expression
variant allelic effects
eQTL
binding sites
tissue
stomach
21
19
3
1
1
small intestine
17
15
1
1
large intestine
14
13
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
+ See 17 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
parietal cell
1
1
1
peptic cell
1
1
1
+ See 6 more…
cell line
HCT116
3
1
HT-29
2
1
1
HCT-116 cell
1
1
1
SW480
1
1
1
colon epithelial cell
1
1
+ See 1 more…
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