Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
16
target gene predictions
15
chromatin state
10
accessible chromatin
8
binding sites
6
histone modifications
4
gene expression
Date released
28
September, 2022
25
February, 2021
June, 2020
2
January, 2021
1
May, 2020
1
May, 2022
1
November, 2021
1
October, 2022
Available data
40
bed bed3+
14
bed bed9
10
bigWig
4
tsv
1
bed bed9+
Organism
59
Homo sapiens
Biosample type
29
cell line
18
tissue
12
primary cell
Organ
824
epithelium
478
kidney
360
connective tissue
334
brain
249
pancreas
223
musculature of body
vasculature
180
heart
174
lung
166
intestine
161
blood vessel
159
bodily fluid
152
blood
148
embryo
144
limb
128
liver
121
skin of body
98
large intestine
85
eye
81
extraembryonic component
72
uterus
69
adipose tissue
65
stomach
62
artery
59
bone element
55
mammary gland
46
prostate gland
46
small intestine
44
adrenal gland
42
placenta
33
lymph node
33
penis
32
ureter
29
gonad
28
thymus
26
esophagus
25
spinal cord
18
nerve
18
spleen
16
lymphatic vessel
16
vein
15
testis
14
ovary
14
skeleton
14
thyroid gland
13
lymphoid tissue
13
pituitary gland
11
bone marrow
11
bronchus
10
mouth
7
breast
6
urinary bladder
6
vagina
5
tongue
4
trachea
2
nose
1
pericardium
Project
56
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
55
hg19
23
GRCh38
annotation_type!
candidate regulatory elements
month_released!
June, 2020
organ_slims!
vasculature
BIOSAMPLE
TYPE
59 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
cell line
MG63
1
1
1
1
OCI-LY1
1
1
1
1
OCI-LY3
1
1
1
SJSA1
1
1
1
U2OS
2
1
+ See 6 more…
tissue
bone tissue
4
arm bone
1
1
femur
1
1
leg bone
1
1
distal epiphysis
1
+ See 7 more…
primary cell
megakaryocyte
2
2
mononuclear cell of bone marrow
2
1
stromal cell of bone marrow
1
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
bone cell
1
+ See 1 more…
See all biosamples
Download