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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
107
target gene predictions
87
chromatin state
30
accessible chromatin
9
histone modifications
6
binding sites
5
eQTL
5
variant allelic effects
Date released
164
September, 2022
28
November, 2021
14
February, 2021
14
June, 2020
8
May, 2021
7
February, 2024
March, 2024
5
August, 2017
5
January, 2022
3
March, 2020
1
October, 2022
Available data
162
bed bed3+
82
bed bed9
16
bigWig
Organism
249
Homo sapiens
Biosample type
187
tissue
36
primary cell
26
cell line
Organ
847
epithelium
491
kidney
380
connective tissue
354
brain
253
pancreas
227
musculature of body
215
vasculature
185
heart
179
lung
173
intestine
170
bodily fluid
164
blood vessel
163
blood
158
embryo
149
limb
133
liver
127
skin of body
103
large intestine
91
eye
87
extraembryonic component
72
uterus
70
adipose tissue
66
stomach
65
artery
64
bone element
59
mammary gland
50
prostate gland
47
small intestine
44
adrenal gland
44
placenta
41
lymph node
36
penis
33
ureter
31
gonad
29
thymus
27
spinal cord
26
esophagus
19
nerve
18
spleen
17
lymphatic vessel
16
testis
16
vein
14
lymphoid tissue
14
ovary
14
skeleton
14
thyroid gland
12
bronchus
12
pituitary gland
11
bone marrow
10
mouth
7
breast
6
urinary bladder
5
tongue
5
trachea
5
vagina
3
nose
1
pericardium
Project
221
AMP
28
ENCODE
Genome assembly (visualization)
244
hg19
117
GRCh38
annotation_type!
candidate regulatory elements
month_released!
March, 2024
BIOSAMPLE
TYPE
249 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
variant allelic effects
tissue
stomach
21
19
3
1
1
small intestine
17
15
1
1
large intestine
14
13
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
+ See 18 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
parietal cell
1
1
1
peptic cell
1
1
1
+ See 8 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 2 more…
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