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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
53
target gene predictions
44
chromatin state
12
accessible chromatin
8
binding sites
5
histone modifications
4
eQTL
3
Fine-mapped variants
1
gene expression
Date released
82
September, 2022
11
February, 2021
9
June, 2020
6
May, 2021
6
November, 2021
4
March, 2020
3
August, 2017
3
January, 2022
2
February, 2024
March, 2024
2
October, 2022
1
February, 2020
1
January, 2020
Available data
81
bed bed3+
41
bed bed9
5
tsv
3
bigWig
Organism
130
Homo sapiens
Biosample type
95
tissue
27
cell line
8
primary cell
Organ
847
epithelium
491
kidney
380
connective tissue
brain
253
pancreas
227
musculature of body
215
vasculature
185
heart
179
lung
173
intestine
170
bodily fluid
164
blood vessel
163
blood
158
embryo
149
limb
133
liver
127
skin of body
103
large intestine
91
eye
87
extraembryonic component
72
uterus
70
adipose tissue
66
stomach
65
artery
64
bone element
59
mammary gland
50
prostate gland
47
small intestine
44
adrenal gland
44
placenta
41
lymph node
36
penis
33
ureter
31
gonad
29
thymus
27
spinal cord
26
esophagus
19
nerve
18
spleen
17
lymphatic vessel
16
testis
16
vein
14
lymphoid tissue
14
ovary
14
skeleton
14
thyroid gland
12
bronchus
12
pituitary gland
11
bone marrow
10
mouth
7
breast
6
urinary bladder
5
tongue
5
trachea
5
vagina
3
nose
1
pericardium
Project
124
AMP
6
ENCODE
Genome assembly (visualization)
126
hg19
56
GRCh38
annotation_type!
candidate regulatory elements
month_released!
March, 2024
organ_slims!
brain
BIOSAMPLE
TYPE
130 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
Fine-mapped variants
gene expression
tissue
large intestine
14
13
1
1
spinal cord
8
7
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
colonic mucosa
2
3
1
+ See 6 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 2 more…
primary cell
colon epithelial cell
3
3
astrocyte of the spinal cord
1
1
See all biosamples
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