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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • candidate regulatory elements
  • 1218target gene predictions
  • 939chromatin state
  • 887accessible chromatin
  • 863histone modifications
  • 817binding sites
  • 599gene expression
  • 186eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 4sQTL
  • 4variant to gene
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1753February, 2021
  • 1679September, 2022
  • May, 2021
  • 376February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4090bed bed3+
  • 3488tsv
  • 864bed bed9
  • 533bigWig
  • 108txt
  • 35bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8522Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 507AMP
  • 497DGA
  • 406T2DKP
  • 281KPMP
  • 208T1D
  • 1744DN
  • 151GTEx
  • 139 T2DKP
  • 128ENCODE
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 76BLUEPRINT
  • 67HPAP
  • 43STARNET
Biosample type
  • 4355tissue
  • 1962cell line
  • 1895primary cell
  • 352in vitro differentiated cells
  • 4stem cell
Organ
  • 2857vasculature
  • 2808bodily fluid
  • 2806blood vessel
  • 2801blood
  • 2651vein
  • 815epithelium
  • 493kidney
  • 376connective tissue
  • 345brain
  • 228musculature of body
  • 220pancreas
  • 181heart
  • 176lung
  • 170intestine
  • 151embryo
  • 147limb
  • 135liver
  • 124skin of body
  • 100large intestine
  • 91eye
  • 84extraembryonic component
  • 77adipose tissue
  • 72uterus
  • 67artery
  • 66stomach
  • 64bone element
  • 57mammary gland
  • 49prostate gland
  • 46small intestine
  • 43adrenal gland
  • 43placenta
  • 40lymph node
  • 35penis
  • 33ureter
  • 32gonad
  • 28esophagus
  • 28thymus
  • 26spinal cord
  • 19nerve
  • 18spleen
  • 17lymphatic vessel
  • 17testis
  • 15lymphoid tissue
  • 14ovary
  • 14skeleton
  • 14thyroid gland
  • 12bronchus
  • 11bone marrow
  • 11mouth
  • 7breast
  • 7urinary bladder
  • 6tongue
  • 6vagina
  • 5trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 7859AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4995hg19
  • 1774GRCh38
  • 4hg18
annotation_type!
  • candidate regulatory elements
month_released!
  • May, 2021
BIOSAMPLE
TYPE

8570 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
variant to gene
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart202151132
kidney14161021711
brain1618231121
stomach19193111
cell line
HeLa-S35431
H1-hESC3811128
A5491818112
K562227112
breast cancer cell119
primary cell
endothelial cell715128122
hepatocyte21841132
macrophage31219311
fibroblast416126
common myeloid progenitor, CD34-positive1313
in vitro differentiated cells
neural progenitor cell5410157
hematopoietic multipotent progenitor cell1010111
adipocyte264111
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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