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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 971histone modifications
  • 907accessible chromatin
  • candidate regulatory elements
  • 817binding sites
  • 689gene expression
  • 523target gene predictions
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 111chromatin state
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1753February, 2021
  • September, 2022
  • 389May, 2021
  • 376February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3576tsv
  • 3529bed bed3+
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 36bed bed9
  • 34bed bed9+
  • 26csv
  • 15bigBed narrowPeak
  • 1bam
Organism
  • 7232Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1847ChIP-Atlas
  • 645DGA
  • 527AMP
  • 421T1D
  • 406T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 173 T2DKP
  • 151GTEx
  • 128ENCODE
  • 108T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 12ROADMAP
Biosample type
  • 3467tissue
  • 1824primary cell
  • 1662cell line
  • 321in vitro differentiated cells
  • 4stem cell
Organ
  • 2809vasculature
  • 2768blood vessel
  • 2762bodily fluid
  • 2759blood
  • 2648vein
  • 746epithelium
  • 343kidney
  • 312connective tissue
  • 236brain
  • 222pancreas
  • 113heart
  • 106liver
  • 104embryo
  • 98musculature of body
  • 73eye
  • 66intestine
  • 66uterus
  • 64adipose tissue
  • 61skin of body
  • 58limb
  • 54artery
  • 40lung
  • 39large intestine
  • 36bone element
  • 31mammary gland
  • 25lymph node
  • 25prostate gland
  • 22stomach
  • 21extraembryonic component
  • 17adrenal gland
  • 17gonad
  • 16penis
  • 14esophagus
  • 13lymphatic vessel
  • 13nerve
  • 13pituitary gland
  • 12placenta
  • 11spinal cord
  • 9bone marrow
  • 9small intestine
  • 9testis
  • 8bronchus
  • 8skeleton
  • 7ovary
  • 7spleen
  • 7thymus
  • 7thyroid gland
  • 7ureter
  • 5lymphoid tissue
  • 5trachea
  • 4breast
  • 3mouth
  • 3urinary bladder
  • 2tongue
  • 2vagina
  • 1nose
  • 1pericardium
Project
  • 6569AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 3614hg19
  • 1032GRCh38
  • 4hg18
annotation_type!
  • candidate regulatory elements
month_released!
  • September, 2022
BIOSAMPLE
TYPE

7280 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
accessible chromatin
binding sites
gene expression
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
islet of Langerhans1521111313222
retina1231111
liver2412392211
kidney21017112
primary cell
monocyte861811524121
CD8-positive, alpha-beta T cell304351
endothelial cell115297122
macrophage12239311
hepatocyte4811322
cell line
HeLa-S3152
H1-hESC112838
EndoC_BH11818131
K562112171
breast cancer cell119
in vitro differentiated cells
neural progenitor cell151071
adipocyte141144
embryonic stem cell16115
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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