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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
121
accessible chromatin
114
target gene predictions
81
gene expression
79
chromatin state
49
binding sites
41
histone modifications
36
eQTL
23
variant allelic effects
20
differential activity
18
Fine-mapped variants
5
caQTL
2
pQTL
Date released
139
September, 2022
92
February, 2021
54
November, 2021
47
February, 2024
28
June, 2020
28
March, 2020
22
May, 2021
22
September, 2023
21
August, 2021
17
January, 2020
17
May, 2020
16
February, 2020
14
October, 2022
11
January, 2022
11
March, 2023
10
August, 2017
7
November, 2022
5
May, 2022
4
February, 2023
3
April, 2020
3
November, 2019
3
November, 2020
3
September, 2018
2
January, 2021
2
May, 2024
2
October, 2019
1
August, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
May, 2019
Available data
365
bed bed3+
113
tsv
85
bigWig
69
bed bed9
7
txt
5
bigBed bed9
3
csv
1
bam
1
bigBed narrowPeak
Organism
589
Homo sapiens
Biosample type
308
primary cell
177
tissue
55
cell line
48
in vitro differentiated cells
1
stem cell
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
504
AMP
54
ENCODE
20
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
469
hg19
219
GRCh38
4
hg18
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
589 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
hepatocyte
8
3
13
1
1
4
2
fibroblast
16
4
1
2
6
pericyte cell
10
10
1
endothelial cell of hepatic sinusoid
6
4
6
osteoblast
5
2
2
1
3
2
+ See 53 more…
tissue
liver
4
10
1
9
1
2
7
1
1
adipose tissue
2
8
3
6
1
4
1
subcutaneous adipose tissue
2
5
1
6
1
1
3
coronary artery
3
3
1
3
2
2
3
1
spinal cord
1
8
7
1
+ See 14 more…
cell line
HepG2
2
3
2
3
5
GM23248
1
1
1
1
1
HuH-7
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
smooth muscle cell of the coronary artery
1
1
1
1
+ See 12 more…
in vitro differentiated cells
adipocyte
4
6
1
6
1
1
mesenchymal stem cell
1
3
2
1
1
chondrocyte
5
hepatocyte(AFP)
3
fibroblast
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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