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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
74
target gene predictions
candidate regulatory elements
52
binding sites
42
chromatin state
35
histone modifications
22
accessible chromatin
10
eQTL
4
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
1
pQTL
1
variant allelic effects
Date released
78
September, 2022
64
February, 2021
29
February, 2024
20
October, 2022
16
June, 2020
10
August, 2021
6
March, 2020
6
May, 2021
5
August, 2017
2
February, 2020
2
January, 2020
2
May, 2022
1
January, 2022
1
March, 2024
1
May, 2020
1
November, 2019
1
November, 2021
1
September, 2018
Available data
189
bed bed3+
37
bed bed9
9
tsv
5
bigWig
1
bam
1
bigBed bed9
Organism
246
Homo sapiens
Biosample type
186
cell line
47
tissue
13
primary cell
Organ
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
245
AMP
1
ENCODE
Genome assembly (visualization)
237
hg19
79
GRCh38
2
hg18
annotation_type!
candidate regulatory elements
organ_slims!
epithelium
BIOSAMPLE
TYPE
246 results
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target gene predictions
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
Fine-mapped variants
caQTL
differential activity
pQTL
variant allelic effects
cell line
K562
23
2
7
1
1
HepG2
3
3
2
5
2
GM12878
8
2
2
1
1
GM19240
2
2
1
1
1
GM06990
1
2
1
1
1
+ See 27 more…
tissue
liver
10
1
9
2
4
7
1
1
1
right lobe of liver
1
1
1
1
3
blood
2
cerebrospinal fluid
1
whole blood
1
primary cell
hepatic stellate cell
1
1
1
3
1
1
peripheral blood stem cell
1
1
1
peripheral blood mononuclear cell
1
1
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