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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
109
target gene predictions
candidate regulatory elements
79
accessible chromatin
52
binding sites
50
chromatin state
50
gene expression
33
differential activity
31
histone modifications
18
eQTL
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
1
pQTL
Date released
93
September, 2022
73
February, 2021
53
February, 2024
47
March, 2023
38
May, 2021
20
January, 2021
19
October, 2022
18
November, 2021
17
June, 2020
11
August, 2021
10
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
August, 2017
5
January, 2022
4
January, 2020
3
November, 2019
2
February, 2020
2
March, 2024
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
289
bed bed3+
78
tsv
58
bigWig
44
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
443
Homo sapiens
Biosample type
192
cell line
131
primary cell
117
tissue
3
in vitro differentiated cells
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
403
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
349
hg19
122
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
443 results
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Clear Filters
target gene predictions
accessible chromatin
binding sites
chromatin state
gene expression
differential activity
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
pQTL
cell line
K562
23
1
2
7
1
EndoC_BH1
1
8
8
3
1
GM12878
8
1
2
2
1
GM19240
2
1
2
1
1
GM06990
1
1
2
1
1
+ See 29 more…
primary cell
pancreatic ductal cell
3
6
1
3
3
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 14 more…
tissue
islet of Langerhans
1
6
2
3
11
1
13
1
2
2
2
spleen
8
2
1
6
1
1
pancreas
5
5
1
3
1
1
1
body of pancreas
5
4
2
1
1
3
endocrine pancreas
4
4
+ See 10 more…
in vitro differentiated cells
pancreatic ductal cell
3
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