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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
106
target gene predictions
87
accessible chromatin
69
chromatin state
54
gene expression
33
differential activity
21
eQTL
19
variant allelic effects
14
Fine-mapped variants
11
histone modifications
9
binding sites
2
sQTL
2
variant to gene
Date released
125
September, 2022
47
March, 2023
46
May, 2021
35
February, 2021
25
February, 2024
22
January, 2021
19
November, 2021
18
March, 2020
17
May, 2020
11
January, 2020
10
June, 2020
8
August, 2021
8
February, 2020
7
August, 2018
7
January, 2022
6
October, 2019
4
November, 2019
3
August, 2017
2
March, 2024
2
May, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2022
Available data
236
bed bed3+
94
tsv
73
bigWig
64
bed bed9
14
bigBed narrowPeak
6
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
1
bed bed9+
Organism
427
Homo sapiens
Biosample type
241
tissue
138
primary cell
45
cell line
3
in vitro differentiated cells
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
384
AMP
22
T1D
19
ENCODE
2
community
Genome assembly (visualization)
327
hg19
142
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
427 results
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Clear Filters
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
histone modifications
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
1
6
3
11
13
1
2
1
2
2
2
muscle of arm
16
1
16
1
muscle of leg
14
2
15
tibial nerve
3
3
4
2
2
2
3
pancreas
5
5
3
1
1
1
1
+ See 30 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 18 more…
cell line
EndoC_BH1
1
8
8
3
1
pituitary stalk
10
GM23248
1
1
1
1
1
Panc1
2
1
8988T
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
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