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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
292
target gene predictions
279
gene expression
262
accessible chromatin
224
chromatin state
92
differential activity
59
variant allelic effects
58
binding sites
40
histone modifications
18
Fine-mapped variants
15
eQTL
4
caQTL
Date released
405
September, 2022
176
February, 2021
155
September, 2023
132
November, 2021
81
February, 2024
45
May, 2021
42
June, 2020
38
March, 2023
36
May, 2020
33
January, 2020
31
August, 2021
31
March, 2020
25
February, 2020
20
January, 2021
15
February, 2023
15
November, 2022
10
October, 2022
8
April, 2020
7
October, 2019
6
April, 2019
6
August, 2018
6
January, 2022
6
November, 2019
4
August, 2017
4
March, 2024
3
May, 2019
2
May, 2022
1
July, 2020
Available data
720
bed bed3+
371
tsv
215
bed bed9
210
bigWig
78
txt
16
bigBed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1343
Homo sapiens
Biosample type
763
primary cell
437
tissue
118
cell line
25
in vitro differentiated cells
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
1026
AMP
155
KPMP
132
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
960
hg19
470
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
1343 results
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Clear Filters
target gene predictions
gene expression
accessible chromatin
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
7
9
15
2
2
1
1
2
hepatocyte
3
13
8
1
2
1
4
epithelial cell of proximal tubule
1
16
1
1
1
1
glomerular endothelial cell
1
14
2
1
1
pancreatic ductal cell
3
3
6
3
1
1
2
+ See 153 more…
tissue
heart
20
3
5
21
2
1
1
lung
17
1
16
1
muscle of arm
16
1
16
1
muscle of leg
14
2
15
left lung
13
13
+ See 55 more…
cell line
A549
19
1
18
2
1
EndoC_BH1
1
8
8
3
1
IMR-90
2
1
1
2
1
PC-9
2
1
1
1
1
GM23248
1
1
1
1
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 5 more…
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