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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
77
accessible chromatin
74
target gene predictions
candidate regulatory elements
50
gene expression
40
chromatin state
33
differential activity
20
binding sites
18
eQTL
12
histone modifications
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
75
September, 2022
47
March, 2023
37
February, 2021
36
May, 2021
26
February, 2024
26
November, 2021
20
January, 2021
12
June, 2020
10
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
4
October, 2022
2
February, 2020
2
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
200
bed bed3+
78
tsv
61
bigWig
35
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
345
Homo sapiens
Biosample type
163
primary cell
120
tissue
56
cell line
6
in vitro differentiated cells
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
297
AMP
26
ENCODE
20
T1D
2
community
Genome assembly (visualization)
249
hg19
94
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
345 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 20 more…
tissue
islet of Langerhans
6
1
11
3
2
13
1
1
2
2
2
pancreas
5
5
3
1
1
1
1
body of pancreas
5
2
4
1
1
3
ovary
1
6
1
4
1
testis
1
3
1
3
1
1
1
+ See 9 more…
cell line
EndoC_BH1
8
1
8
3
1
MCF-7
1
6
5
3
2
NT2-D1 cell
1
1
1
2
T47D
2
2
Panc1
2
1
+ See 4 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
See all biosamples
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