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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
135
target gene predictions
99
chromatin state
97
accessible chromatin
61
gene expression
34
differential activity
25
eQTL
18
variant allelic effects
15
binding sites
14
histone modifications
11
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
183
September, 2022
47
March, 2023
40
February, 2024
40
May, 2021
37
February, 2021
31
November, 2021
20
January, 2021
19
March, 2020
14
June, 2020
11
May, 2020
9
August, 2021
9
January, 2020
8
February, 2020
8
January, 2022
7
August, 2018
7
October, 2019
6
August, 2017
4
March, 2024
4
October, 2022
3
May, 2022
2
May, 2019
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
290
bed bed3+
92
bed bed9
92
tsv
74
bigWig
14
bigBed narrowPeak
5
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
515
Homo sapiens
Biosample type
289
tissue
176
primary cell
46
cell line
4
in vitro differentiated cells
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
462
AMP
31
ENCODE
20
T1D
2
community
Genome assembly (visualization)
411
hg19
170
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
515 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
caQTL
sQTL
variant to gene
tissue
islet of Langerhans
1
3
6
11
13
1
2
1
2
2
2
muscle of arm
16
16
1
1
muscle of leg
14
15
2
muscle of back
13
13
pancreas
5
3
5
1
1
1
1
+ See 29 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
1
2
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 24 more…
cell line
EndoC_BH1
1
8
8
3
1
LHCN-M2
1
1
1
1
1
NT2-D1 cell
1
1
1
2
A673
2
1
Panc1
2
1
+ See 5 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
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