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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
target gene predictions
candidate regulatory elements
40
chromatin state
13
accessible chromatin
10
binding sites
7
histone modifications
4
gene expression
3
eQTL
Date released
74
September, 2022
53
February, 2024
15
February, 2021
9
June, 2020
8
November, 2021
7
May, 2021
4
March, 2024
3
August, 2017
3
January, 2022
2
October, 2022
1
March, 2020
Available data
135
bed bed3+
37
bed bed9
4
bigWig
4
tsv
Organism
179
Homo sapiens
Biosample type
85
tissue
83
cell line
11
primary cell
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
171
AMP
8
ENCODE
Genome assembly (visualization)
172
hg19
101
GRCh38
annotation_type!
candidate regulatory elements
organ_slims!
spinal cord
BIOSAMPLE
TYPE
179 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
tissue
large intestine
14
13
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
colonic mucosa
2
3
1
uterus
2
1
1
1
1
+ See 10 more…
cell line
HeLa-S3
55
3
1
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
+ See 2 more…
primary cell
colon epithelial cell
3
3
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
See all biosamples
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