Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
target gene predictions
candidate regulatory elements
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
66
September, 2022
52
July, 2026
10
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
2
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
122
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
157
Homo sapiens
Collection Tags
66
EpiMap
52
ENCODE-rE2G
17
ChIP-Atlas
6
AMP
6
DGA
6
T2DKP
2
4DN
2
GTEx
2
T1D
2
T2D
2
eQTLCatalogue
1
ENCODE
Biosample type
103
tissue
48
cell line
6
primary cell
Organ
3322
blood
2852
vasculature
2822
blood vessel
2806
bodily fluid
2653
vein
852
epithelium
792
brain
597
kidney
438
connective tissue
392
heart
309
lung
295
pancreas
245
intestine
240
musculature of body
221
skin of body
205
liver
158
embryo
157
large intestine
150
limb
143
eye
123
adipose tissue
115
extraembryonic component
111
muscle organ
89
stomach
84
uterus
81
bone element
78
artery
76
mammary gland
74
adrenal gland
73
thymus
68
placenta
60
__MARKER__
60
prostate gland
60
small intestine
48
spleen
47
gonad
42
ureter
41
lymph node
39
thyroid gland
36
penis
33
spinal cord
31
esophagus
24
ovary
22
testis
20
skeleton
19
nerve
17
lymphatic vessel
15
lymphoid tissue
13
mouth
13
pituitary gland
12
bronchus
11
bone marrow
10
breast
10
urinary bladder
8
tongue
8
vagina
5
trachea
3
nose
1
embryonic structure
1
gallbladder
1
pericardium
Project
151
AMP
6
ENCODE
Genome assembly (visualization)
101
hg19
95
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
157 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
28
13
1
1
sigmoid colon
10
5
1
transverse colon
9
4
1
1
colonic mucosa
4
3
1
mucosa of rectum
2
3
+ See 8 more…
cell line
HCT116
19
1
HT-29
3
1
1
1
1
SW480
2
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 4 more…
primary cell
colon epithelial cell
3
3
See all biosamples
Download