Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • candidate regulatory elements
  • 25gene expression
  • 24accessible chromatin
  • 21target gene predictions
  • 17chromatin state
  • 14histone modifications
  • 13binding sites
  • 10eQTL
  • 5differential activity
  • 4Fine-mapped variants
  • 4variant allelic effects
  • 1caQTL
Date released
  • 32September, 2022
  • 29February, 2024
  • 17February, 2021
  • 10August, 2021
  • 10March, 2020
  • 5June, 2020
  • 5March, 2025
  • 5November, 2021
  • 4March, 2023
  • 3August, 2017
  • 3January, 2020
  • 3May, 2020
  • 3May, 2021
  • 2February, 2020
  • 2May, 2022
  • 1January, 2022
  • 1July, 2020
  • 1November, 2019
  • 1October, 2022
  • 1September, 2018
Available data
  • 83bed bed3+
  • 33tsv
  • 23bigWig
  • 14bed bed9
  • 3csv
  • 1bam
  • 1bigBed bed9
Organism
  • 138Homo sapiens
Collection Tags
  • 47DGA
  • 34AMP
  • 28EpiMap
  • 18T2DKP
  • 17ChIP-Atlas
  • 14 T2DKP
  • 6STARNET
  • 5GTEx
  • 4HPAP
  • 2ENCODE
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 61primary cell
  • 48tissue
  • 24cell line
  • 5in vitro differentiated cells
Organ
  • 2860vasculature
  • 2812bodily fluid
  • 2809blood vessel
  • 2805blood
  • 2652vein
  • 849epithelium
  • 493kidney
  • 392connective tissue
  • 356brain
  • 253pancreas
  • 234musculature of body
  • 185heart
  • 180lung
  • 176intestine
  • 158embryo
  • 150limb
  • 138liver
  • 129skin of body
  • 105large intestine
  • 91eye
  • 87extraembryonic component
  • 80adipose tissue
  • 74uterus
  • 69artery
  • 68stomach
  • 64bone element
  • 59mammary gland
  • 51prostate gland
  • 47small intestine
  • 45adrenal gland
  • 44placenta
  • 41lymph node
  • 36penis
  • 33gonad
  • 33ureter
  • 29thymus
  • 28esophagus
  • 27spinal cord
  • 19nerve
  • 19spleen
  • 17lymphatic vessel
  • 17testis
  • 15lymphoid tissue
  • 15ovary
  • 15thyroid gland
  • 14skeleton
  • 13pituitary gland
  • 12bronchus
  • 11bone marrow
  • 11mouth
  • 8breast
  • 7urinary bladder
  • 6tongue
  • 6vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 133AMP
  • 5ENCODE
Genome assembly (visualization)
  • 101hg19
  • 60GRCh38
  • 2hg18
annotation_type!
  • candidate regulatory elements
BIOSAMPLE
TYPE

138 results

search-icontable-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
primary cell
hepatocyte13831412
endothelial cell of hepatic sinusoid466
hepatic stellate cell131111
pancreatic endothelial cell13
Liver fetal (hepatocyte)1
tissue
liver24109219211
right lobe of liver11113
cell line
HepG223253
HuH-711111
HuH-7.511
hepatic stellate cell11
in vitro differentiated cells
hepatocyte(AFP)3
hepatocyte11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego