Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • candidate regulatory elements
  • 80target gene predictions
  • 74chromatin state
  • 27accessible chromatin
  • 12gene expression
  • 9eQTL
  • 7Fine-mapped variants
  • 7binding sites
  • 7histone modifications
  • 7variant allelic effects
  • 2caQTL
  • 2differential activity
Date released
  • 136September, 2022
  • 15February, 2024
  • 14February, 2021
  • 11November, 2021
  • 9March, 2020
  • 6February, 2020
  • 6June, 2020
  • 6May, 2021
  • 5January, 2020
  • 5March, 2025
  • 5May, 2020
  • 3August, 2017
  • 3May, 2022
  • 3October, 2022
  • 2March, 2024
  • 2May, 2019
  • 1August, 2021
  • 1January, 2022
  • 1October, 2019
Available data
  • 138bed bed3+
  • 71bed bed9
  • 19tsv
  • 16bigWig
  • 3bigBed bed9
Organism
  • 234Homo sapiens
Collection Tags
  • 136EpiMap
  • 32DGA
  • 30 T2DKP
  • 19ChIP-Atlas
  • 18T2DKP
  • 13AMP
  • 12GTEx
  • 6STARNET
  • 4T2D
  • 1ENCODE
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 176tissue
  • 46primary cell
  • 11cell line
  • 1in vitro differentiated cells
Organ
  • 2860vasculature
  • 2812bodily fluid
  • 2809blood vessel
  • 2805blood
  • 2652vein
  • 849epithelium
  • 493kidney
  • 392connective tissue
  • 356brain
  • 253pancreas
  • 234musculature of body
  • 185heart
  • 180lung
  • 176intestine
  • 158embryo
  • 150limb
  • 138liver
  • 129skin of body
  • 105large intestine
  • 91eye
  • 87extraembryonic component
  • 80adipose tissue
  • 74uterus
  • 69artery
  • 68stomach
  • 64bone element
  • 59mammary gland
  • 51prostate gland
  • 47small intestine
  • 45adrenal gland
  • 44placenta
  • 41lymph node
  • 36penis
  • 33gonad
  • 33ureter
  • 29thymus
  • 28esophagus
  • 27spinal cord
  • 19nerve
  • 19spleen
  • 17lymphatic vessel
  • 17testis
  • 15lymphoid tissue
  • 15ovary
  • 15thyroid gland
  • 14skeleton
  • 13pituitary gland
  • 12bronchus
  • 11bone marrow
  • 11mouth
  • 8breast
  • 7urinary bladder
  • 6tongue
  • 6vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 223AMP
  • 11ENCODE
Genome assembly (visualization)
  • 221hg19
  • 96GRCh38
annotation_type!
  • candidate regulatory elements
BIOSAMPLE
TYPE

234 results

search-icontable-tab-icon
Clear Filters
target gene predictions
chromatin state
accessible chromatin
gene expression
eQTL
Fine-mapped variants
binding sites
histone modifications
variant allelic effects
caQTL
differential activity
tissue
muscle of arm161611
muscle of leg14152
muscle of back1313
psoas muscle841
gastrocnemius medialis541
primary cell
skeletal muscle satellite cell2252
skeletal muscle fiber522
type I muscle cell13111
type II muscle cell13111
skeletal muscle cell1111
cell line
LHCN-M211111
A67321
SJCRH30111
in vitro differentiated cells
myotube1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego