Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
21
chromatin state
21
target gene predictions
6
accessible chromatin
6
binding sites
4
histone modifications
1
eQTL
1
gene expression
1
variant allelic effects
Date released
36
September, 2022
8
February, 2021
3
June, 2020
2
January, 2020
2
May, 2020
2
May, 2021
2
November, 2021
2
October, 2022
1
August, 2017
1
January, 2022
1
March, 2020
1
March, 2024
Available data
38
bed bed3+
20
bed bed9
3
bigWig
2
bigBed bed9
1
tsv
Organism
61
Homo sapiens
Biosample type
35
tissue
22
primary cell
4
cell line
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
nose
1
pericardium
Project
59
AMP
2
ENCODE
Genome assembly (visualization)
58
hg19
24
GRCh38
annotation_type!
candidate regulatory elements
organ_slims!
nose
BIOSAMPLE
TYPE
61 results
search-icon
table-tab-icon
Clear Filters
chromatin state
target gene predictions
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
placenta
14
15
1
1
2
1
whole blood
1
primary cell
endothelial cell of umbilical vein
5
4
2
2
1
fibroblast of villous mesenchyme
1
1
1
2
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
cell line
HTR-8/Svneo
1
1
vein endothelial cell
1
1
Download