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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 913accessible chromatin
  • 726binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1753February, 2021
  • 846September, 2022
  • 384May, 2021
  • 371February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 152May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 83January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 44November, 2022
  • 38March, 2025
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 15May, 2022
  • 13November, 2019
  • 10October, 2022
  • 9August, 2018
  • 9October, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4244bed bed3+
  • 3576tsv
  • 544bigWig
  • 108txt
  • 26csv
  • 16bigBed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 7876Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 833EpiMap
  • 636DGA
  • 533AMP
  • 421T1D
  • 404T2DKP
  • 281KPMP
  • 185BLUEPRINT
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 37ENCODE
  • 12ROADMAP
Biosample type
  • 3875tissue
  • 1931primary cell
  • 1766cell line
  • 347in vitro differentiated cells
  • 3stem cell
Organ
  • 2823vasculature
  • 2779blood vessel
  • 2766bodily fluid
  • 2761blood
  • 2646vein
  • 791epithelium
  • 414kidney
  • 333connective tissue
  • 278brain
  • 236pancreas
  • 159musculature of body
  • 134heart
  • 129embryo
  • 120liver
  • 116intestine
  • 105lung
  • 100limb
  • 90skin of body
  • 80eye
  • 70adipose tissue
  • 69uterus
  • 68large intestine
  • 60artery
  • 53extraembryonic component
  • 48bone element
  • 44stomach
  • 41mammary gland
  • 38prostate gland
  • 31adrenal gland
  • 31lymph node
  • 27placenta
  • 27small intestine
  • 24gonad
  • 24penis
  • 21esophagus
  • 20ureter
  • 18spinal cord
  • 18thymus
  • 15lymphatic vessel
  • 15nerve
  • 13pituitary gland
  • 13spleen
  • 12testis
  • 11ovary
  • 11skeleton
  • 11thyroid gland
  • 10bronchus
  • 10lymphoid tissue
  • 9bone marrow
  • 7mouth
  • 6breast
  • 5trachea
  • 5urinary bladder
  • 4tongue
  • 4vagina
  • 2nose
  • 1pericardium
Project
  • 7213AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4258hg19
  • 1002GRCh38
  • 4hg18
annotation_type!
  • candidate regulatory elements
software_used.software.name!
  • chromhmm
BIOSAMPLE
TYPE

7924 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
islet of Langerhans116211131222
kidney142101711
heart2015132
liver1024129211
primary cell
monocyte286181154121
CD8-positive, alpha-beta T cell53043
endothelial cell711529122
hepatocyte3481132
macrophage31229311
cell line
HeLa-S355
H1-hESC391118
K56223111
EndoC_BH11181831
A54919111
in vitro differentiated cells
neural progenitor cell515107
hematopoietic multipotent progenitor cell101111
adipocyte61411
cardiomyocytes11
embryonic stem cell1161
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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