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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • candidate regulatory elements
  • 1357target gene predictions
  • 944chromatin state
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 93binding sites
  • 84Fine-mapped variants
  • 74accessible chromatin
  • 13caQTL
  • 7sQTL
  • 4variant to gene
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1667September, 2022
  • 322February, 2024
  • 286September, 2023
  • 243May, 2021
  • 184February, 2021
  • 155May, 2020
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 81August, 2021
  • 70March, 2023
  • 64February, 2020
  • 38March, 2025
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 19April, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 3576tsv
  • 1842bed bed3+
  • 869bed bed9
  • 108txt
  • 90bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 6365Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1666EpiMap
  • 573DGA
  • 281KPMP
  • 262AMP
  • 252T1D
  • 1744DN
  • 151GTEx
  • 148T2DKP
  • 141 T2DKP
  • 122ENCODE
  • 101T2D
  • 101eQTLCatalogue
  • 98BLUEPRINT
  • 55HPAP
  • 43STARNET
  • 24CMDGA
Biosample type
  • 4072tissue
  • 1441primary cell
  • 704cell line
  • 190in vitro differentiated cells
  • 4stem cell
Organ
  • 2803vasculature
  • 2766blood vessel
  • 2748bodily fluid
  • 2743blood
  • 2648vein
  • 579epithelium
  • 435kidney
  • 262connective tissue
  • 258brain
  • 194musculature of body
  • 180pancreas
  • 159lung
  • 148heart
  • 142intestine
  • 126limb
  • 123embryo
  • 89liver
  • 89skin of body
  • 85large intestine
  • 71extraembryonic component
  • 70adipose tissue
  • 66uterus
  • 59stomach
  • 48artery
  • 44small intestine
  • 38adrenal gland
  • 38mammary gland
  • 36bone element
  • 35placenta
  • 31prostate gland
  • 29ureter
  • 25gonad
  • 25thymus
  • 24esophagus
  • 24eye
  • 24spinal cord
  • 23penis
  • 19lymph node
  • 16nerve
  • 16spleen
  • 13ovary
  • 13thyroid gland
  • 12lymphoid tissue
  • 12pituitary gland
  • 12testis
  • 11lymphatic vessel
  • 10mouth
  • 7breast
  • 7bronchus
  • 6skeleton
  • 6urinary bladder
  • 6vagina
  • 5bone marrow
  • 5tongue
  • 2nose
  • 1pericardium
Project
  • 5952AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 2756hg19
  • 1377GRCh38
  • 4hg18
annotation_type!
  • candidate regulatory elements
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

6413 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
chromatin state
gene expression
eQTL
differential activity
variant allelic effects
binding sites
Fine-mapped variants
accessible chromatin
caQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart202132
stomach211911
kidney1416711
brain1618121
primary cell
common myeloid progenitor, CD34-positive1413
monocyte2154211
B cell10823
CD14-positive monocyte194
endothelial cell79122
cell line
HeLa-S35531
H1-hESC39181
A54919181
K5622371
HFFc619
in vitro differentiated cells
hematopoietic multipotent progenitor cell10101
neural progenitor cell547
adipocyte661
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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