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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • candidate regulatory elements
  • 944chromatin state
  • 685gene expression
  • 484differential activity
  • 397accessible chromatin
  • 180eQTL
  • 141variant allelic effects
  • 93binding sites
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 4variant to gene
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 1984July, 2026
  • 1667September, 2022
  • 320May, 2026
  • 317February, 2024
  • 286September, 2023
  • 243May, 2021
  • 184February, 2021
  • 155May, 2020
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 81August, 2021
  • 70March, 2023
  • 64February, 2020
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 19April, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 3826bed bed3+
  • 3551tsv
  • 869bed bed9
  • 112txt
  • 90bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 8648Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1666EpiMap
  • 1458ENCODE-rE2G
  • 573DGA
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 262AMP
  • 252T1D
  • 1744DN
  • 151GTEx
  • 148T2DKP
  • 141 T2DKP
  • 133CATlas
  • 122ENCODE
  • 101T2D
  • 101eQTLCatalogue
  • 98BLUEPRINT
  • 55HPAP
  • 24CMDGA
Biosample type
  • 4700tissue
  • 2845primary cell
  • 911cell line
  • 234in vitro differentiated cells
  • 4stem cell
Organ
  • 3260blood
  • 2795vasculature
  • 2779blood vessel
  • 2742bodily fluid
  • 2649vein
  • 694brain
  • 581epithelium
  • 539kidney
  • 355heart
  • 307connective tissue
  • 288lung
  • 222pancreas
  • 211intestine
  • 196musculature of body
  • 181skin of body
  • 156liver
  • 137large intestine
  • 126limb
  • 123embryo
  • 113adipose tissue
  • 111muscle organ
  • 99extraembryonic component
  • 80stomach
  • 76eye
  • 76uterus
  • 69thymus
  • 67adrenal gland
  • 60__MARKER__
  • 59placenta
  • 57artery
  • 57small intestine
  • 55mammary gland
  • 53bone element
  • 45spleen
  • 40prostate gland
  • 39gonad
  • 38ureter
  • 37thyroid gland
  • 30spinal cord
  • 27esophagus
  • 23penis
  • 22ovary
  • 19lymph node
  • 17testis
  • 16nerve
  • 12lymphoid tissue
  • 12mouth
  • 12pituitary gland
  • 12skeleton
  • 11lymphatic vessel
  • 9breast
  • 9urinary bladder
  • 8vagina
  • 7bronchus
  • 7tongue
  • 5bone marrow
  • 2nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 8231AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 3361GRCh38
  • 2756hg19
  • 4hg18
annotation_type!
  • candidate regulatory elements
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

8696 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
chromatin state
gene expression
differential activity
accessible chromatin
eQTL
variant allelic effects
binding sites
Fine-mapped variants
caQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
head of caudate nucleus86
heart3821412
stomach421911
dorsolateral prefrontal cortex5711
primary cell
fibroblast281024261
endothelial cell179258223
T-cell64
CD4-positive, alpha-beta T cell523
macrophage1321710832
cell line
HeLa-S35931
A54933181
H1-hESC39181
K5623071
HCT116191
in vitro differentiated cells
hematopoietic multipotent progenitor cell22101
neural progenitor cell647
adipocyte761
cardiomyocytes11
progenitor cell of endocrine pancreas19
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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