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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 817binding sites
  • 689gene expression
  • 172differential activity
  • 141variant allelic effects
  • 72Fine-mapped variants
  • 60eQTL
  • 13caQTL
  • 5hQTL
  • 4sQTL
  • 3meQTL
  • 3other
  • 2variant to gene
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 1752February, 2021
  • 1679September, 2022
  • 389May, 2021
  • 371February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 101October, 2022
  • 89January, 2020
  • 64March, 2023
  • 63February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 11March, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5January, 2022
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4267bed bed3+
  • 3541tsv
  • 869bed bed9
  • 546bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 24csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8763Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 640DGA
  • 534AMP
  • 406T2DKP
  • 320T1D
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 168 T2DKP
  • 151GTEx
  • 128ENCODE
  • 94CMDGA
  • 67HPAP
  • 16STARNET
  • 12ROADMAP
  • 10T2D
Biosample type
  • 4298tissue
  • 2101primary cell
  • 2015cell line
  • 391in vitro differentiated cells
  • 4stem cell
Organ
  • 2851vasculature
  • 2806bodily fluid
  • 2800blood vessel
  • 2799blood
  • 2652vein
  • 848epithelium
  • 492kidney
  • 375connective tissue
  • 339brain
  • 243pancreas
  • 227musculature of body
  • 182heart
  • 179lung
  • 173intestine
  • 158embryo
  • 148limb
  • 134liver
  • 126skin of body
  • 103large intestine
  • 90eye
  • 86extraembryonic component
  • 73uterus
  • 71adipose tissue
  • 67stomach
  • 64bone element
  • 63artery
  • 59mammary gland
  • 50prostate gland
  • 46small intestine
  • 44adrenal gland
  • 43placenta
  • 41lymph node
  • 36penis
  • 33ureter
  • 30gonad
  • 29thymus
  • 26spinal cord
  • 25esophagus
  • 18nerve
  • 18spleen
  • 17lymphatic vessel
  • 15lymphoid tissue
  • 15testis
  • 14ovary
  • 14skeleton
  • 14thyroid gland
  • 12bronchus
  • 12pituitary gland
  • 11bone marrow
  • 10mouth
  • 7breast
  • 7urinary bladder
  • 6tongue
  • 5trachea
  • 5vagina
  • 3nose
  • 1pericardium
Project
  • 8104AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 9community
  • 5ITG
Genome assembly (visualization)
  • 5287hg19
  • 1769GRCh38
  • 4hg18
annotation_type!
  • candidate regulatory elements
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

8811 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
hQTL
sQTL
meQTL
other
variant to gene
representative DNase hypersensitivity sites
tissue
whole blood26351
heart201215132
kidney14216101711
stomach2111931
brain163182111
primary cell
monocyte286181151211
CD8-positive, alpha-beta T cell530143
endothelial cell71152922
hepatocyte34181132
common myeloid progenitor, CD34-positive1413
cell line
HeLa-S35531
H1-hESC3911128
A5491911812
K562231712
EndoC_BH11181831
in vitro differentiated cells
neural progenitor cell5154107
hematopoietic multipotent progenitor cell10110111
adipocyte616411
embryonic stem cell11561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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