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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • candidate regulatory elements
  • 817binding sites
  • 524target gene predictions
  • 186eQTL
  • 141variant allelic effects
  • 130differential activity
  • 84Fine-mapped variants
  • 15gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1576February, 2021
  • 846September, 2022
  • 333November, 2021
  • 311February, 2024
  • 299May, 2021
  • 289June, 2020
  • 155May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 75August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 26February, 2020
  • 19April, 2020
  • 15March, 2023
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2May, 2024
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 3538bed bed3+
  • 2903tsv
  • 869bed bed9
  • 546bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 7358Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 833EpiMap
  • 438DGA
  • 425AMP
  • 402T2DKP
  • 327T1D
  • 181BLUEPRINT
  • 1744DN
  • 130 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 100ENCODE
  • 96GTEx
  • 43STARNET
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 3813tissue
  • 1825cell line
  • 1480primary cell
  • 282in vitro differentiated cells
  • 4stem cell
Organ
  • 2801vasculature
  • 2785bodily fluid
  • 2781blood
  • 2766blood vessel
  • 2649vein
  • 530epithelium
  • 297connective tissue
  • 277brain
  • 216kidney
  • 160pancreas
  • 155musculature of body
  • 128heart
  • 121embryo
  • 118intestine
  • 109lung
  • 105liver
  • 99limb
  • 93skin of body
  • 81eye
  • 70large intestine
  • 68uterus
  • 59adipose tissue
  • 55artery
  • 54extraembryonic component
  • 46bone element
  • 45mammary gland
  • 43stomach
  • 37prostate gland
  • 33lymph node
  • 30adrenal gland
  • 28placenta
  • 28small intestine
  • 26penis
  • 23gonad
  • 20ureter
  • 19esophagus
  • 18spinal cord
  • 18thymus
  • 14nerve
  • 12lymphatic vessel
  • 12pituitary gland
  • 12spleen
  • 12testis
  • 11skeleton
  • 10bone marrow
  • 10bronchus
  • 10ovary
  • 10thyroid gland
  • 9lymphoid tissue
  • 6mouth
  • 5breast
  • 5trachea
  • 4urinary bladder
  • 3tongue
  • 3vagina
  • 2nose
Project
  • 6866AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4444hg19
  • 1871GRCh38
  • 4hg18
annotation_type!
  • candidate regulatory elements
software_used.software.name!
  • r
BIOSAMPLE
TYPE

7406 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
chromatin state
accessible chromatin
binding sites
target gene predictions
eQTL
variant allelic effects
differential activity
Fine-mapped variants
gene expression
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
liver2941382111
heart1215112
islet of Langerhans13621111222
kidney21610111
cell line
HeLa-S33152
H1-hESC111238
K562171217
A549118121
breast cancer cell119
primary cell
monocyte8618124121
CD8-positive, alpha-beta T cell30145
endothelial cell11527122
fibroblast161426
macrophage1239311
in vitro differentiated cells
neural progenitor cell154101
adipocyte16414
embryonic stem cell15611
hematopoietic multipotent progenitor cell11011
T-cell acute lymphoblastic leukemia53
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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