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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1581
candidate regulatory elements
1294
target gene predictions
968
histone modifications
884
accessible chromatin
chromatin state
809
binding sites
662
gene expression
differential activity
165
eQTL
130
variant allelic effects
65
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2527
February, 2021
1584
September, 2022
379
May, 2021
368
February, 2024
322
November, 2021
282
June, 2020
176
September, 2023
141
May, 2020
120
August, 2021
112
March, 2020
103
January, 2022
101
October, 2022
72
January, 2020
56
January, 2021
53
February, 2020
44
November, 2022
30
March, 2024
28
February, 2023
19
April, 2020
19
March, 2023
15
May, 2022
10
November, 2019
9
August, 2018
8
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5672
bed bed3+
713
tsv
522
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6545
Homo sapiens
Biosample type
2142
cell line
2088
primary cell
1933
tissue
425
in vitro differentiated cells
3
stem cell
Organ
804
epithelium
519
kidney
398
connective tissue
394
brain
300
musculature of body
240
lung
230
intestine
227
pancreas
215
vasculature
heart
194
limb
191
bodily fluid
187
embryo
182
blood
169
skin of body
164
blood vessel
138
large intestine
135
liver
113
extraembryonic component
100
eye
95
stomach
79
uterus
77
adipose tissue
74
bone element
72
mammary gland
65
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
17
lymphatic vessel
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
trachea
3
nose
1
pericardium
Project
6014
AMP
322
ENCODE
171
KPMP
60
T1D
19
LungMap
5
ITG
2
community
Genome assembly (visualization)
5799
hg19
959
GRCh38
4
hg18
annotation_type!
chromatin state
differential activity
organ_slims!
heart
thymus
trachea
BIOSAMPLE
TYPE
6593 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
MCF-7
9
6
2
1
3
+ See 762 more…
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 433 more…
tissue
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 243 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 120 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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